Robert F. Murphy

	2009
38		Robert F. Murphy, Chun-Nan Hsu, Loris Nanni: Workshop summary: Automated interpretation and modelling of cell images. ICML 2009: 164
37		Amr Ahmed, Eric P. Xing, William W. Cohen, Robert F. Murphy: Structured correspondence topic models for mining captioned figures in biological literature. KDD 2009: 39-48
36		Charles Jackson, Robert F. Murphy, Jelena Kovacevic: Intelligent Acquisition and Learning of Fluorescence Microscope Data Models. IEEE Transactions on Image Processing 18(9): 2071-2084 (2009)
	2008
35		Mourad Elloumi, Josef Küng, Michal Linial, Robert F. Murphy, Kristan Schneider, Cristian Toma: Bioinformatics Research and Development, Second International Conference, BIRD 2008, Vienna, Austria, July 7-9, 2008, Proceedings Springer 2008
34		Luís Pedro Coelho, Robert F. Murphy: Identifying Subcellular Locations from Images of Unknown Resolution. BIRD 2008: 235-242
33		Estelle Glory, Justin Newberg, Robert F. Murphy: Automated comparison of protein subcellular location patterns between images of normal and cancerous tissues. ISBI 2008: 304-307
32		Robert F. Murphy: Automated proteome-wide determination of subcellular location using high throughput microscopy. ISBI 2008: 308-311
31		Gustavo K. Rohde, Wei Wang, Tao Peng, Robert F. Murphy: Deformation-based nonlinear dimension reduction: Applications to nuclear morphometry. ISBI 2008: 500-503
30		Yuntao Qian, Robert F. Murphy: Improved recognition of figures containing fluorescence microscope images in online journal articles using graphical models. Bioinformatics 24(4): 569-576 (2008)
	2007
29		Xiang Chen, Robert F. Murphy: Interpretation of Protein Subcellular Location Patterns in 3D Images Across Cell Types and Resolutions. BIRD 2007: 328-342
28		Charles Jackson, Robert F. Murphy, Jelena Kovacevic: Efficient Acquisition and Learning of Fluorescence Microscope Data Models. ICIP (6) 2007: 245-248
27		Robert F. Murphy: Systematic Description of Subcellular Location for Integration with Proteomics Databases and Systems Biology Modeling. ISBI 2007: 1052-1055
26		Juchang Hua, Orhan N. Ayasli, William W. Cohen, Robert F. Murphy: Identifying Fluorescence Microscope Images in Online Journal Articles Using Both Image and Text Features. ISBI 2007: 1224-1227
25		Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, Robert F. Murphy: Automated image analysis of protein localization in budding yeast. ISMB/ECCB (Supplement of Bioinformatics) 2007: 66-71
24		Zhenzhen Kou, William W. Cohen, Robert F. Murphy: A Stacked Graphical Model for Associating Sub-Images with Sub-Captions. Pacific Symposium on Biocomputing 2007: 257-268
23		Amina Chebira, Yann Barbotin, Charles Jackson, Thomas E. Merryman, Gowri Srinivasa, Robert F. Murphy, Jelena Kovacevic: A multiresolution approach to automated classification of protein subcellular location images. BMC Bioinformatics 8: (2007)
	2006
22		Shann-Ching Chen, Ting Zhao, Geoffrey J. Gordon, Robert F. Murphy: A Novel Graphical Model Approach to Segmenting Cell Images. CIBCB 2006: 1-8
21		Yanhua Hu, Jesus Carmona, Robert F. Murphy: Application of temporal texture features to automated analysis of protein subcellular locations in time series fluorescence microscope images. ISBI 2006: 1028-1031
20		Shann-Ching Chen, Geoffrey J. Gordon, Robert F. Murphy: A novel approximate inference approach to automated classification of protein subcellular location patterns in multi-cell images. ISBI 2006: 558-561
19		Ting Zhao, Stalia Soto, Robert F. Murphy: Improved comparison of protein subcellular location patterns. ISBI 2006: 562-565
18		Lionel Coulot, Heather Kirschner, Amina Chebira, José M. F. Moura, Jelena Kovacevic, Elvira Garcia Osuna, Robert F. Murphy: Topology preserving STACS segmentation of protein subcellular location images. ISBI 2006: 566-569
17		Shann-Ching Chen, Robert F. Murphy: A graphical model approach to automated classification of protein subcellular location patterns in multi-cell images. BMC Bioinformatics 7: 90 (2006)
	2005
16		Zhenzhen Kou, William W. Cohen, Robert F. Murphy: High-recall protein entity recognition using a dictionary. ISMB (Supplement of Bioinformatics) 2005: 266-273
15		Robert F. Murphy, Christos Faloutsos: Research issues in protein location image databases. SIGMOD Conference 2005: 966-967
14		Kai Huang, Robert F. Murphy: Data Mining Methods for a Systematics of Protein Subcellular Location. Data Mining in Bioinformatics 2005: 143-187
13		T. Zhao, Meel Velliste, Michael V. Boland, Robert F. Murphy: Object Type Recognition for Automated Analysis of Protein Subcellular Location. IEEE Transactions on Image Processing 14(9): 1351-1359 (2005)
	2004
12		Kai Huang, Robert F. Murphy: Automated Classification of Subcellular Patterns In Multicell Images Without Segmentation Into Single Cells. ISBI 2004: 1139-1142
11		Robert F. Murphy: Automated Interpretation of Subcellular Location Patterns. ISBI 2004: 53-56
10		Kai Huang, Robert F. Murphy: Boosting accuracy of automated classification of fluorescence microscope images for location proteomics. BMC Bioinformatics 5: 78 (2004)
9		A. K. Singh, B. S. Manjunath, Robert F. Murphy: A Distributed Database for BioMolecular Images. SIGMOD Record 33(2): 65-71 (2004)
	2003
8		Zhenzhen Kou, William W. Cohen, Robert F. Murphy: Extracting information from text and images for location proteomics. BIOKDD 2003: 2-9
7		William W. Cohen, Richard C. Wang, Robert F. Murphy: Understanding captions in biomedical publications. KDD 2003: 499-504
6		Robert F. Murphy, Meel Velliste, Gregory Porreca: Robust Numerical Features for Description and Classification of Subcellular Location Patterns in Fluorescence Microscope Images. VLSI Signal Processing 35(3): 311-321 (2003)
	2002
5		Kai Huang, Jennifer Lin, James A. Gajnak, Robert F. Murphy: Image content-based retrieval and automated interpretation of fluorescence microscope images via the protein subcellular location image database. ISBI 2002: 325-328
4		Meel Velliste, Robert F. Murphy: Automated determination of protein subcellular locations from 3D fluorescence microscope images. ISBI 2002: 867-870
	2001
3		Robert F. Murphy, Meel Velliste, Jie Yao, Gregory Porreca: Searching Online Journals for Fluorescence Microscope Images Depicting Protein Subcellular Location Patterns. BIBE 2001: 119-128
2		Michael V. Boland, Robert F. Murphy: A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells. Bioinformatics 17(12): 1213-1223 (2001)
	2000
1		Robert F. Murphy, Michael V. Boland, Meel Velliste: Towards a Systematics for Protein Subcellular Location: Quantitative Description of Protein Localization Patterns and Automated Analysis of Fluorescence Microscope Images. ISMB 2000: 251-259

Coauthor Index

1	Amr Ahmed	[37]
2	Orhan N. Ayasli	[26]
3	Yann Barbotin	[23]
4	Michael V. Boland	[1] [2] [13]
5	Jesus Carmona	[21]
6	Amina Chebira	[18] [23]
7	Shann-Ching Chen	[17] [20] [22] [25]
8	Xiang Chen	[29]
9	Luís Pedro Coelho	[34]
10	William W. Cohen	[7] [8] [16] [24] [26] [37]
11	Lionel Coulot	[18]
12	Mourad Elloumi	[35]
13	Christos Faloutsos	[15]
14	James A. Gajnak	[5]
15	Estelle Glory	[33]
16	Geoffrey J. Gordon	[20] [22] [25]
17	Chun-Nan Hsu	[38]
18	Yanhua Hu	[21]
19	Juchang Hua	[26]
20	Kai Huang	[5] [10] [12] [14]
21	Charles Jackson	[23] [28] [36]
22	Heather Kirschner	[18]
23	Zhenzhen Kou	[8] [16] [24]
24	Jelena Kovacevic	[18] [23] [28] [36]
25	Josef Küng	[35]
26	Jennifer Lin	[5]
27	Michal Linial	[35]
28	B. S. Manjunath	[9]
29	Thomas E. Merryman	[23]
30	José M. F. Moura	[18]
31	Loris Nanni	[38]
32	Justin Newberg	[33]
33	Elvira Garcia Osuna	[18]
34	Tao Peng	[31]
35	Gregory Porreca	[3] [6]
36	Yuntao Qian	[30]
37	Gustavo K. Rohde	[31]
38	Kristan Schneider	[35]
39	A. K. Singh	[9]
40	Stalia Soto	[19]
41	Gowri Srinivasa	[23]
42	Cristian Toma	[35]
43	Meel Velliste	[1] [3] [4] [6] [13]
44	Richard C. Wang	[7]
45	Wei Wang	[31]
46	Eric P. Xing	[37]
47	Jie Yao	[3]
48	T. Zhao	[13]
49	Ting Zhao	[19] [22] [25]

Colors in the list of coauthors