2009 | ||
---|---|---|
42 | Ivo Grosse, Steffen Neumann, Stefan Posch, Falk Schreiber, Peter F. Stadler: German Conference on Bioinformatics 2009, 28th to 30th September 2009, Martin Luther University Halle-Wittenberg, Germany GI 2009 | |
41 | Stephan Weise, Christian Colmsee, Eva Grafahrend-Belau, Björn H. Junker, Christian Klukas, Matthias Lange, Uwe Scholz, Falk Schreiber: An Integration and Analysis Pipeline for Systems Biology in Crop Plant Metabolism. DILS 2009: 196-203 | |
40 | Hendrik Rohn, Christian Klukas, Falk Schreiber: Integration and Visualisation of Multimodal Biological Data. GCB 2009: 105-115 | |
39 | Thilo Fester, Falk Schreiber, Marc Strickert: CUDA-based Multi-core Implementation of MDS-based Bioinformatics Algorithms. GCB 2009: 67-79 | |
38 | David Cho Yau Fung, Seok-Hee Hong, Dirk Koschützki, Falk Schreiber, Kai Xu: Visual Analysis of Overlapping Biological Networks. IV 2009: 337-342 | |
37 | Rainer Pielot, Udo Seiffert, Bertram Manz, Diana Weier, Frank Volke, Falk Schreiber, Winfriede Weschke: Multimodal Registration of NMR-volumes and Histological Cross-sections of Barley Grains on the Cell Broadband Engine Processor. VISSAPP (1) 2009: 241-244 | |
36 | Eva Grafahrend-Belau, Christian Klukas, Björn H. Junker, Falk Schreiber: FBA-SimVis: interactive visualization of constraint-based metabolic models. Bioinformatics 25(20): 2755-2757 (2009) | |
35 | Falk Schreiber: Analyse und Visualisierung biologischer Netzwerke. Informatik Spektrum 32(4): 301-309 (2009) | |
2008 | ||
34 | Eva Grafahrend-Belau, Falk Schreiber, Monika Heiner, Andrea Sackmann, Björn H. Junker, Stefanie Grunwald, Astrid Speer, Katja Winder, Ina Koch: Modularization of biochemical networks based on classification of Petri net t-invariants. BMC Bioinformatics 9: (2008) | |
33 | Tim Dwyer, Kim Marriott, Falk Schreiber, Peter J. Stuckey, Michael Woodward, Michael Wybrow: Exploration of Networks using overview+detail with Constraint-based cooperative layout. IEEE Trans. Vis. Comput. Graph. 14(6): 1293-1300 (2008) | |
32 | David Cho Yau Fung, Seok-Hee Hong, Dirk Koschützki, Falk Schreiber, Kai Xu: 2.5D Visualisation of Overlapping Biological Networks. J. Integrative Bioinformatics 5(1): (2008) | |
31 | Eva Grafahrend-Belau, Stephan Weise, Dirk Koschützki, Uwe Scholz, Björn H. Junker, Falk Schreiber: MetaCrop: a detailed database of crop plant metabolism. Nucleic Acids Research 36(Database-Issue): 954-958 (2008) | |
2007 | ||
30 | Christian Klukas, Falk Schreiber: Dynamic exploration and editing of KEGG pathway diagrams. Bioinformatics 23(3): 344-350 (2007) | |
29 | Michael Telgkamp, Dirk Koschützki, Henning Schwöbbermeyer, Falk Schreiber: Community-based Linking of Biological Network Resources: Databases, Formats and Tools. J. Integrative Bioinformatics 4(3): (2007) | |
2006 | ||
28 | Tim Dwyer, Seok-Hee Hong, Dirk Koschützki, Falk Schreiber, Kai Xu: Visual analysis of network centralities. APVIS 2006: 189-197 | |
27 | Christian Klukas, Falk Schreiber, Henning Schwöbbermeyer: Coordinated perspectives and enhanced force-directed layout for the analysis of network motifs. APVIS 2006: 39-48 | |
26 | Björn H. Junker, Christian Klukas, Falk Schreiber: VANTED: A system for advanced data analysis and visualization in the context of biological networks. BMC Bioinformatics 7: 109 (2006) | |
25 | Björn H. Junker, Dirk Koschützki, Falk Schreiber: Exploration of biological network centralities with CentiBiN. BMC Bioinformatics 7: 219 (2006) | |
24 | Stephan Weise, Ivo Grosse, Christian Klukas, Dirk Koschützki, Uwe Scholz, Falk Schreiber, Björn H. Junker: Meta-All: a system for managing metabolic pathway information. BMC Bioinformatics 7: 465 (2006) | |
23 | Björn H. Junker, Dirk Koschützki, Falk Schreiber: Kinetic Modelling with the Systems Biology Modelling Environment SyBME. J. Integrative Bioinformatics 3(1): (2006) | |
2005 | ||
22 | Falk Schreiber, Henning Schwöbbermeyer: MAVisto: a tool for the exploration of network motifs. Bioinformatics 21(17): 3572-3574 (2005) | |
21 | Christian Klukas, Dirk Koschützki, Falk Schreiber: Graph Pattern Analysis with PatternGravisto. J. Graph Algorithms Appl. 9(1): 19-29 (2005) | |
20 | Falk Schreiber, Henning Schwöbbermeyer: Frequency Concepts and Pattern Detection for the Analysis of Motifs in Networks. T. Comp. Sys. Biology: 89-104 (2005) | |
2004 | ||
19 | Carsten Friedrich, Falk Schreiber: Flexible Layering in Hierarchical Drawings with Nodes of Arbitrary Size. ACSC 2004: 369-376 | |
18 | Tim Dwyer, Hardy Rolletschek, Falk Schreiber: Representing Experimental Biological Data in Metabolic Networks. APBC 2004: 13-20 | |
17 | Dirk Koschützki, Falk Schreiber: Comparison of Centralities for Biological Networks. German Conference on Bioinformatics 2004: 199-206 | |
16 | Tim Dwyer, Falk Schreiber: Optimal Leaf Ordering for Two and a Half Dimensional Phylogenetic Tree Visualisation. InVis.au 2004: 109-115 | |
15 | Ulrik Brandes, Tim Dwyer, Falk Schreiber: Visual Triangulation of Network-Based Phylogenetic Trees. VisSym 2004: 75-83 | |
14 | Ljudmilla Borisjuk, Mohammad-Reza Hajirezaei, Christian Klukas, Hardy Rolletschek, Falk Schreiber: Integrating data from biological experiments into metabolic networks with the DBE information system. In Silico Biology 5: (2004) | |
13 | Ulrik Brandes, Tim Dwyer, Falk Schreiber: Visual Understanding of Metabolic Pathways Across Organisms Using Layout in Two and a Half Dimensions. J. Integrative Bioinformatics 1(1): (2004) | |
2003 | ||
12 | Falk Schreiber: Comparison of Metabolic Pathways using Constraint Graph Drawing. APBC 2003: 105-110 | |
11 | Ulrik Brandes, Tim Dwyer, Falk Schreiber: Visualizing Related Metabolic Pathways in Two and a Half Dimensions. Graph Drawing 2003: 111-122 | |
10 | Falk Schreiber: Visual comparison of metabolic pathways. J. Vis. Lang. Comput. 14(4): 327-340 (2003) | |
2002 | ||
9 | Michael Forster, Andreas Pick, Marcus Raitner, Falk Schreiber, Franz-Josef Brandenburg: The system architecture of the BioPath system. In Silico Biology 2: 37 (2002) | |
8 | Falk Schreiber: High quality visualization of biochemical pathways in BioPath. In Silico Biology 2: 6 (2002) | |
2001 | ||
7 | Franz-Josef Brandenburg, Michael Forster, Andreas Pick, Marcus Raitner, Falk Schreiber: BioPath Visualization of Biochemical Pathways. German Conference on Bioinformatics 2001: 11-15 | |
6 | Franz-Josef Brandenburg, Michael Forster, Andreas Pick, Marcus Raitner, Falk Schreiber: BioPath. Graph Drawing 2001: 455-456 | |
1999 | ||
5 | Carl-Christian Kanne, Falk Schreiber, Dietrich Trümbach: Interactive Biochemical Pathways. German Conference on Bioinformatics 1999: 204-205 | |
4 | Franz-Josef Brandenburg, Michael Jünger, Joe Marks, Petra Mutzel, Falk Schreiber: Graph-Drawing Contest Report. Graph Drawing 1999: 400-409 | |
3 | Carl-Christian Kanne, Falk Schreiber, Dietrich Trümbach: Electronic Biochemical Pathways. Graph Drawing 1999: 418-419 | |
1998 | ||
2 | Falk Schreiber, Konstantin Skodinis: NP-Completeness of Some Tree-Clustering Problems. Graph Drawing 1998: 288-301 | |
1997 | ||
1 | Michael von der Beeck, Volker Braun, Andreas Claßen, Achim Dannecker, Carsten Friedrich, Dirk Koschützki, Tiziana Margaria, Falk Schreiber, Bernhard Steffen: Graphs in METAFrame: The Unifying Power of Polymorphism. TACAS 1997: 112-129 |