4. BIBE 2004:
Taichung,
Taiwan,
ROC
4th IEEE International Symposium on BioInformatics and BioEngineering (BIBE 2004), 19-21 March 2004, Taichung, Taiwan.
IEEE Computer Society 2004, ISBN 0-7695-2173-8
Keynote Speech
- Wen-Hwa Lee:
Tumor Suppressor Gene Networks as Molecular Targets for Developing New Cancer Treatments.
1-4
Invited Speech
Bioengineering
- Andreas Schmid:
Retionomorphic Information Processing for Electrical Epi-Retinal Vision Implant Stimulation.
9-16
- Yung-Kang Chen, Hsien-Tsai Wu, Chih-Kai Chi, Wei-Chuan Tsai, Ju-Yi Chen, Ming-Chun Wang:
A New Dual Channel Pulse Wave Velocity Measurement System.
17-21
- Daniele Masotti, Elisa Ficarra, Enrico Macii, Luca Benini:
Techniques for Enhancing Computation of DNA Curvature Molecules.
22-29
- Gloria Y. Yang, Vasudev J. Bailey, Gisela Lin, William C. Tang, Joyce H. Keyak:
Design of Microfabricated Strain Gauge Array to Monitor Bone Deformation In Vitro and In Vivo.
30-37
- Weili Zheng, Aamer Aziz, Ihar Volkov, Xin Ma, F. S. Chau, M. Ang Jr., Wieslaw Lucjan Nowinski:
Towards Automating an Interventional Radiology Procedure.
38-46
Data Integration and Protein Folding
- Ane Tröger, Alvaro A. A. Fernandes:
A Language for Comprehensively Supporting the In Vitro Experimental Process In Silico.
47-56
- Pengyu Hong, Sheng Zhong, Wing Hung Wong:
Towards Ubiquitous Bio-Information Computing: Data Protocols, Middleware, and Web Services for Heterogeneous Biological Information Integration and Retrieval.
57-64
- Zina Ben-Miled, Lingma Lu, Malika Mahoui, Jessica Chen, Omran A. Bukhres, Ning Gao, Yue He:
A Service Discovery Approach in Support of Web Service Integration.
65-72
- Reiichiro Nakamichi, Seiya Imoto, Satoru Miyano:
Case-Control Study of Binary Disease Trait Considering Interactions between SNPs and Environmental Effects using Logistic Regression.
73-78
- Eunice E. Santos, Eugene Santos Jr.:
Reducing the Computational Load of Energy Evaluations for Protein Folding.
79-88
Invited Speech
Medical Image Processing I
- Qingmao Hu, Wieslaw Lucjan Nowinski:
Knowledge-Driven Extraction of the Four Modified Talairach Cortical Landmarks (A, P, L, and R) from MR Neuroimages.
93-99
- Ruey-Feng Chang, Chii-Jen Chen, Ming-Feng Ho, Dar-Ren Chen, Woo Kyung Moon:
Breast Ultrasound Image Classification Using Fractal Analysis.
100-107
- Louise Chuang, Jeng-Yang Hwang, Hen-Chang Chang, I-Chang Jou, Shiang-Bin Jong:
Quantitative Computer Image Analysis of Serum a-fetoprotein Rapid Gold Immunochromatographic Dipstick Assay.
108-114
- Wenlong Qian, Zujun Hou, Qingmao Hu, Aamer Aziz, Wieslaw Lucjan Nowinski:
Segmentation of the Sylvian Fissure in Brain Mr Images.
115-124
Parallel Processing and Primer Design
- Weng-Long Chang, Michael (Shan-Hui) Ho, Minyi Guo:
Fast Parallel Molecular Algorithms for DNA-based Computation: Factoring Integers.
125-133
- Damon Shing-Min Liu, Che-Hao Wu:
An Effective Approach for Constructing the Phylogenetic Tree on a Grid-Based Architecture.
134-141
- Shih-Nung Chen, Jeffrey J. P. Tsai, Chih-Wei Huang, Rong-Ming Chen, Raymond C. K. Lin:
Using Distributed Computing Platform to Solve High Computing and Huge Data Processing Problems in Bioinformatics.
142-148
- K. Rocha, C. Medeiros, M. Monteiro, L. Gonçalves, P. Marinho:
Design of Specie-Specific Primers for Virus Diagnosis in Plants with PCR.
149-158
Medical Image Processing II
Medical Informatics
- Marco Masseroli, Andrea Stella, Natalia Meani, Myriam Alcalay, Francesco Pinciroli:
GeneWebEx: Gene Annotation Web Extraction, Aggregation, and Updating from Web-Based Biomolecular Databanks.
199-206
- David Pérez-Rey, Victor Maojo, Miguel García-Remesal, R. Alonso-Calvo:
Biomedical Ontologies in Post-Genomic Information Systems.
207-214
- Ferran Sanz, Carlos Díaz, Fernando Martín-Sánchez, Julio Bonis:
European Support to Biomedical Informatics Development: in Pursue of Genomic Medicine.
215-221
- Victoria López-Alonso, J. P. Sanchez, I. Liebana, Isabel Hermosilla, Fernando Martín-Sánchez:
INBIOMED: a Platform for the Integration and Sharing of Genetic, Clinical and Epidemiological Data Oriented to Biomedical Research.
222-226
- Miguel García-Remesal, Victor Maojo, Holger Billhardt, José Crespo, R. Alonso-Calvo, David Pérez-Rey, Fernando Martin, A. Sousa:
ARMEDA II: Supporting Genomic Medicine through the Integration of Medical and Genetic Databases.
227-236
Banquet Speech
- Hiroshi Yamaguchi:
Accelerating Trans-disciplinary Research to a Knowledge-sharing Infrastracture.
237-240
Keynote Speech
- Eva Y.-H. P. Lee:
Protein Network in DNA Damage Response and Breast Carcinogenesis.
241-244
Invited Speech
Gene Expression
- Xiaohua Hu:
Integration of Cluster Ensemble and Text Summarization for Gene Expression Analysis.
251-258
- Kevin Y. Yip, David W. Cheung, Michael K. Ng, Kei-Hoi Cheung:
Identifying Projected Clusters from Gene Expression Profiles.
259-266
- Fang-Xiang Wu, Wen-Jun Zhang, Anthony J. Kusalik:
Model-Based Clustering with Genes Expression Dynamics for Time-Course Gene Expression Data.
267-274
- Sungroh Yoon, Christine Nardini, Luca Benini, Giovanni De Micheli:
Enhanced pClustering and Its Applications to Gene Expression Data.
275-282
- Zonghong Zhang, Alvin Teo, Beng Chin Ooi, Kian-Lee Tan:
Mining Deterministic Biclusters in Gene Expression Data.
283-292
Transcriptome and Functional Genomics
- Hsun-Chang Chang, Po-Shun Yu, Tze-Wei Huang, Yaw-Ling Lin, Fang-Rong Hsu:
The Application of Alternative Splicing Graphs in Quantitative Analysis of Alternative Splicing Form from EST Database.
293-300
- Judith Zimmermann, Zsuzsanna Lipták, Scott Hazelhurst:
A Method for Evaluating the Quality of String Dissimilarity Measures and Clustering Algorithms for EST Clustering.
301-309
- Fang-Rong Hsu, Hwan-You Chang, Yaw-Ling Lin, Yin-Te Tsai, Hui-Ling Peng, Ying Tsong Chen, Che Feng Chen, Chia Yang Cheng, Chia-Hung Liu, Min Yao Shih:
Genome-Wide Alternative Splicing Events Detection through Analysis of Large Scale ESTs.
310-316
- Francisco Azuaje, Olivier Bodenreider:
Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study.
317-324
- Jorng-Tzong Horng, Kai-Chih Hu, Li-Cheng Wu, Hsien-Da Huang, Horn-Cheng Lai, Ton-Yuen Chu:
Identifying the Combination of Genetic Factors that Determine Susceptibility to Cervical Cancer.
325-332
Invited Speech
Microarray Data Analysis
- Osman Abul, Reda Alhajj, Faruk Polat:
Markov Decision Processes Based Optimal Control Policies for Probabilistic Boolean Network.
337-344
- Hsieh-Hui Yu, Vincent Shin-Mu Tseng, Jiin-Haur Chuang:
A Multi-Information based Gene Scoring Model with Applications on Analysis of Hepatocellular Carcinoma.
345-350
- Karuturi R. Krishna Murthy, Vinsensius B. Vega:
Friendly Neighbors Method for Unsupervised Determination of Gene Significance in Time-course Microarray Data.
351-357
- Han-Yu Chuang, Hongfang Liu, Stuart Brown, Cameron McMunn-Coffran, Cheng-Yan Kao, D. Frank Hsu:
Identifying Significant Genes from Microarray Data.
358-365
- Selnur Erdal, Ozgur Ozturk, David L. Armbruster, Hakan Ferhatosmanoglu, William C. Ray:
A Time Series Analysis of Microarray Data.
366-378
Homology Search
- Kwok Pui Choi, Fanfan Zeng, Louxin Zhang:
Good Spaced Seeds For Homology Search.
379-386
- Gregory Kucherov, Laurent Noé, Yann Ponty:
Estimating Seed Sensitivity on Homogeneous Alignments.
387-394
- Hsiao Ping Lee, Yin-Te Tsai, Ching Hua Shih, Tzu Fang Sheu, Chuan Yi Tang:
An IDC-based Algorithm for Efficient Homology Filtration with Guaranteed Seriate Coverage.
395-402
- S. Alireza Aghili, Ozgur D. Sahin, Divyakant Agrawal, Amr El Abbadi:
Efficient Filtration of Sequence Similarity Search Through Singular Value Decomposition.
403-410
- I-Hsuan Yang, Sheng-Ho Wang, Yang-Ho Chen, Pao-Hsian Huang, Liang Ye, Xiaoqiu Huang, Kun-Mao Chao:
Efficient Methods for Generating Optimal Single and Multiple Spaced Seeds.
411-418
Proteomics
Sequence Analysis
- Paul Hsueh-Min Chang, Von-Wun Soo, Tai-Yu Chen, Wei-Shen Lai, Shiun-Cheng Su, Yu-Ling Huang:
Automating the Determination of Open Reading Frames in Genomic Sequences Using the Web Service Techniques -- A Case Study using SARS Coronavirus.
451-458
- Falcon F. M. Liu, Jeffrey J. P. Tsai, Rong-Ming Chen, S. N. Chen, S. H. Shih:
FMGA: Finding Motifs by Genetic Algorithm.
459-466
- Scott Mann, Yi-Ping Phoebe Chen, Luke Eaton:
A Computational Framework for Nucleic Acid Sub-Sequence Identification.
467-474
- Chia-Hung Chang, Han-Yu Chuang, Yi-Hung Chiang, Chien-Shun Chiou, Hsueh-I Lu, Cheng-Yan Kao:
Automatically Predicting Possible Loci of Variable Number of Tandem Repeats.
475-482
- Xiaoan Dong, Sam Yuan Sung, Wing-Kin Sung, Chew Lim Tan:
Constraint Based Method for Finding Motifs in DNA Sequences.
483-492
Keynote Speech
- Richard C. T. Lee:
Application of Visual Display Techniques to Solve Some Biological Problems.
493-496
Invited Speech
Structural Biology
Algorithms
- Chuan-Min Lee, Ling-Ju Hung, Maw-Shang Chang, Chuan Yi Tang:
An Improved Algorithm for the Maximum Agreement Subtree Problem.
533-536
- Tatsuya Akutsu, Morihiro Hayashida, Etsuji Tomita, Jun'ichi Suzuki, Katsuhisa Horimoto:
Protein Threading with Profiles and Constraints.
537-544
- Ho-Leung Chan, Tak Wah Lam, Wing-Kin Sung, Prudence W. H. Wong, Siu-Ming Yiu:
A Mutation-Sensitive Approach for Locating Conserved Gene Pairs between Related Species.
545-552
- M. C. Chen, Richard C. T. Lee:
Sorting by Transpositions Based on the First Increasing Substring Concept.
553-560
Protein-Protein Interactions
Algorithms and Intelligent Systems
- Gina Cooper, Michael L. Raymer, Travis E. Doom, Don Krane, Natsuhiko Futamura:
Indexing Genomic Databases.
587-591
- Jijun Tang, Bernard M. E. Moret, Liying Cui, Claude W. dePamphilis:
Phylogenetic Reconstruction from Arbitrary Gene-Order Data.
592-599
- Fei Xie, Phillip C.-Y. Sheu, Arthur Lander, Vittorio Cristini:
Semantic Analysis and Synthesis of Complex Biological Systems.
600-610
Copyright © Fri Mar 12 17:06:52 2010
by Michael Ley (ley@uni-trier.de)