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DBLP keys2009
49Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider: Special Issue: Biomedical Ontology in Action. Applied Ontology 4(1): 1-4 (2009)
48Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLStefan Schulz, Elena Beisswanger, László van den Hoek, Olivier Bodenreider, Erik M. van Mulligen: Alignment of the UMLS semantic network with BioTop: methodology and assessment. Bioinformatics 25(12): (2009)
47Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLLowell Vizenor, Olivier Bodenreider, Alexa T. McCray: Auditing associative relations across two knowledge sources. Journal of Biomedical Informatics 42(3): 426-439 (2009)
46Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFleur Mougin, Olivier Bodenreider, Anita Burgun: Analyzing polysemous concepts from a clinical perspective: Application to auditing concept categorization in the UMLS. Journal of Biomedical Informatics 42(3): 440-451 (2009)
45Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Lee B. Peters: A graph-based approach to auditing RxNorm. Journal of Biomedical Informatics 42(3): 558-570 (2009)
44Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJames J. Cimino, Terry F. Hayamizu, Olivier Bodenreider, Brian Davis, Grace A. Stafford, Martin Ringwald: The caBIG terminology review process. Journal of Biomedical Informatics 42(3): 571-580 (2009)
2008
43Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider: Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues. DILS 2008: 1-4
42Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFleur Mougin, Anita Burgun, Olivier Bodenreider, Julie Chabalier, Olivier Loréal, Pierre Le Beux: Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System. DILS 2008: 61-76
41Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider: Comparing SNOMED CT and the NCI Thesaurus through Semantic Web Technologies. KR-MED 2008
40Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJeremy Rogers, Olivier Bodenreider: SNOMED CT: Browsing the Browsers. KR-MED 2008
39Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider: Provenance Information in Biomedical Knowledge Repositories - A Use Case. SWPM 2008
38Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichael Gruninger, Olivier Bodenreider, Frank Olken, Leo Obrst, Peter Yim: Ontology Summit 2007 - Ontology, taxonomy, folksonomy: Understanding the distinctions. Applied Ontology 3(3): 191-200 (2008)
37Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider: Guest-editorial. Applied Ontology 3(4): 201-203 (2008)
36Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSatya Sanket Sahoo, Olivier Bodenreider, Joni L. Rutter, Karen J. Skinner, Amit P. Sheth: An ontology-driven semantic mashup of gene and biological pathway information: Application to the domain of nicotine dependence. Journal of Biomedical Informatics 41(5): 752-765 (2008)
2007
35Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFleur Mougin, Julie Chabalier, Olivier Bodenreider, Anita Burgun: Méthodes de mapping situées aux niveaux instance et schéma pour l'intégration de sources de données hétérogènes. Actes d'IC 2007: 37-49
34Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSatya Sanket Sahoo, Kelly Zeng, Olivier Bodenreider, Amit P. Sheth: From "Glycosyltransferase" to "Congenital Muscular Dystrophy": Integrating Knowledge from NCBI Entrez Gene and the Gene Ontology. MedInfo 2007: 1260-1264
33Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLKin Wah Fung, Olivier Bodenreider, Alan R. Aronson, William T. Hole, Suresh Srinivasan: Combining Lexical and Semantic Methods of Inter-terminology Mapping Using the UMLS. MedInfo 2007: 605-609
32Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Olivier Bodenreider: Lessons Learned from Cross-Validating Alignments between Large Anatomical Ontologies. MedInfo 2007: 822-826
31Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Olivier Bodenreider: Hybrid Alignment Strategy for Anatomical Ontologies: Results of the 2007 Ontology Alignment Contest. OM 2007
30Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun: Investigating subsumption in SNOMED CT: An exploration into large description logic-based biomedical terminologies. Artificial Intelligence in Medicine 39(3): 183-195 (2007)
29Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Peter Mork, Olivier Bodenreider, Philip A. Bernstein: Comparing two approaches for aligning representations of anatomy. Artificial Intelligence in Medicine 39(3): 227-236 (2007)
28Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAlan Ruttenberg, Tim Clark, William Bug, Matthias Samwald, Olivier Bodenreider, Helen Chen, Donald Doherty, Kerstin Forsberg, Yong Gao, Vipul Kashyap, June Kinoshita, Joanne Luciano, M. Scott Marshall, Chimezie Ogbuji, Jonathan Rees, Susie Stephens, Gwendolyn T. Wong, Elizabeth Wu, Davide Zaccagnini, Tonya Hongsermeier, Eric Neumann, Ivan Herman, Kei-Hoi Cheung: Advancing translational research with the Semantic Web. BMC Bioinformatics 8(S-3): (2007)
27Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Olivier Bodenreider: Experience in Aligning Anatomical Ontologies. Int. J. Semantic Web Inf. Syst. 3(2): 1-26 (2007)
2006
26no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider: KR-MED 2006, Formal Biomedical Knowledge Representation, Proceedings of the Second International Workshop on Formal Biomedical Knowledge Representation: "Biomedical Ontology in Action" (KR-MED 2006), Collocated with the 4th International Conference on Formal Ontology in Information Systems (FOIS-2006), Baltimore, Maryland, USA, November 8, 2006 CEUR-WS.org 2006
25Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFrancisco Azuaje, Haiying Wang, Huiru Zheng, Olivier Bodenreider, Alban Chesneau: Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions. ICDM Workshops 2006: 114-119
24Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Olivier Bodenreider: Aligning Multiple Anatomical Ontologies through a Reference. Ontology Matching 2006
23Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Olivier Bodenreider: NLM Anatomical Ontology Alignment System. Results of the 2006 Ontology Alignment Contest. Ontology Matching 2006
22Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLK. Bretonnel Cohen, Olivier Bodenreider, Lynette Hirschman: Session Introduction. Pacific Symposium on Biocomputing 2006: 1-3
21Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRobert Stevens, Olivier Bodenreider, Yves A. Lussier: Session Introduction. Pacific Symposium on Biocomputing 2006: 112-115
20Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Olivier Bodenreider, Christine Golbreich: Experience in Reasoning with the Foundational Model of Anatomy in OWL DL. Pacific Symposium on Biocomputing 2006: 200-211
19Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFleur Mougin, Anita Burgun, Olivier Bodenreider: Mapping data elements to terminological resources for integrating biomedical data sources. BMC Bioinformatics 7(S-3): (2006)
18Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Robert Stevens: Bio-ontologies: current trends and future directions. Briefings in Bioinformatics 7(3): 256-274 (2006)
17Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChristine Golbreich, Songmao Zhang, Olivier Bodenreider: The foundational model of anatomy in OWL: Experience and perspectives. J. Web Sem. 4(3): 181-195 (2006)
2005
16Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHaiying Wang, Francisco Azuaje, Olivier Bodenreider: An Ontology-Driven Clustering Method for Supporting Gene Expression Analysis. CBMS 2005: 389-394
15Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Marc Aubry, Anita Burgun: Non-Lexical Approaches to Identifying Associative Relations in the Gene Ontology. Pacific Symposium on Biocomputing 2005: 104-115
14Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLM. N. Cantor, Indra Neil Sarkar, Olivier Bodenreider, Yves A. Lussier: GenesTrace: Phenomic Knowledge Discovery via Structured Terminology. Pacific Symposium on Biocomputing 2005: 116-127
13Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray: Session Introduction: Biomedical Ontologies. Pacific Symposium on Biocomputing 2005: 89-92
2004
12Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFrancisco Azuaje, Olivier Bodenreider: Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study. BIBE 2004: 317-324
11Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Peter Mork, Olivier Bodenreider: Lessons learned from aligning two representations of anatomy. KR-MED 2004: 102-108
10Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun: Investigating subsumption in DL-based terminologies: A Case Study in SNOMED CT . KR-MED 2004: 12-20
9Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray: Session Introduction. Pacific Symposium on Biocomputing 2004: 164-165
8Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSongmao Zhang, Olivier Bodenreider: Investigating Implicit Knowledge in Ontologies with Application to the Anatomical Domain. Pacific Symposium on Biocomputing 2004: 250-261
7no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider: The Unified Medical Language System (UMLS): integrating biomedical terminology. Nucleic Acids Research 32(Database-Issue): 267-270 (2004)
2003
6Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray: Biomedical Ontologies - Session Introduction. Pacific Symposium on Biocomputing 2003: 562-564
5Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMehmet Kayaalp, Alan R. Aronson, Susanne M. Humphrey, Nicholas C. Ide, Lorraine K. Tanabe, Lawrence H. Smith, Dina Demner-Fushman, Russell R. Loane, James G. Mork, Olivier Bodenreider: Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics. TREC 2003: 441-450
4Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Alexa T. McCray: Exploring semantic groups through visual approaches. Journal of Biomedical Informatics 36(6): 414-432 (2003)
2002
3no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Thomas C. Rindflesch, Anita Burgun: Unsupervised, corpus-based method for extending a biomedical terminology. ACL Workshop on Natural Language Processing in the Biomedical Domain 2002: 53-60
2Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOlivier Bodenreider, Anita Burgun, Thomas C. Rindflesch: Assessing the consistency of a biomedical terminology through lexical knowledge. I. J. Medical Informatics 67(1-3): 85-95 (2002)
2001
1Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAnita Burgun, Olivier Bodenreider: Aspects of the taxonomic relation in the biomedical domain. FOIS 2001: 222-233

Coauthor Index

1Alan R. Aronson [5] [33]
2Marc Aubry [15]
3Francisco Azuaje [12] [16] [25]
4Elena Beisswanger [48]
5Philip A. Bernstein [29]
6Pierre Le Beux [42]
7William Bug [28]
8Anita Burgun [1] [2] [3] [10] [15] [19] [30] [35] [42] [46]
9M. N. Cantor [14]
10Julie Chabalier [35] [42]
11Helen Chen [28]
12Alban Chesneau [25]
13Kei-Hoi Cheung [28]
14James J. Cimino [44]
15Tim Clark [28]
16K. Bretonnel Cohen [22]
17Brian Davis [44]
18Dina Demner-Fushman [5]
19Donald Doherty [28]
20Kerstin Forsberg [28]
21Kin Wah Fung [33]
22Yong Gao [28]
23Christine Golbreich [17] [20]
24Michael Gruninger [38]
25Terry F. Hayamizu [44]
26Ivan Herman (Iván Herman) [28]
27Lynette Hirschman [22]
28László van den Hoek [48]
29William T. Hole [33]
30Tonya Hongsermeier [28]
31Susanne M. Humphrey [5]
32Nicholas C. Ide [5]
33Vipul Kashyap [28]
34Mehmet Kayaalp [5]
35June Kinoshita [28]
36Anand Kumar [10] [30]
37Russell R. Loane [5]
38Olivier Loréal [42]
39Joanne Luciano [28]
40Yves A. Lussier [14] [21]
41M. Scott Marshall [28]
42Alexa T. McCray [4] [6] [9] [13] [47]
43Joyce A. Mitchell [6] [9] [13]
44James G. Mork [5]
45Peter Mork [11] [29]
46Fleur Mougin [19] [35] [42] [46]
47Erik M. van Mulligen [48]
48Eric Neumann [28]
49Leo Obrst [38]
50Chimezie Ogbuji [28]
51Frank Olken [38]
52Lee B. Peters [45]
53Jonathan Rees [28]
54Thomas C. Rindflesch [2] [3]
55Martin Ringwald [44]
56Jeremy Rogers [40]
57Alan Ruttenberg [28]
58Joni L. Rutter [36]
59Satya Sanket Sahoo [34] [36]
60Matthias Samwald [28]
61Indra Neil Sarkar [14]
62Stefan Schulz [48]
63Amit P. Sheth [34] [36]
64Karen J. Skinner [36]
65Barry Smith [10] [30]
66Lawrence H. Smith [5]
67Suresh Srinivasan [33]
68Grace A. Stafford [44]
69Susie Stephens [28]
70Robert Stevens (Robert D. Stevens) [18] [21]
71Lorraine K. Tanabe [5]
72Lowell Vizenor [47]
73Haiying Wang [16] [25]
74Gwendolyn T. Wong [28]
75Elizabeth Wu [28]
76Peter Yim [38]
77Davide Zaccagnini [28]
78Kelly Zeng [34]
79Songmao Zhang [8] [11] [17] [20] [23] [24] [27] [29] [31] [32]
80Huiru Zheng [25]

Colors in the list of coauthors

Copyright © Fri Mar 12 12:56:28 2010 by Michael Ley (ley@uni-trier.de)