Tamer Kahveci

	2009
36		Tamer Kahveci: Index Structures for Biological Sequences. Encyclopedia of Database Systems 2009: 1428-1432
35		Jun Liu, Nirmalya Bandyopadhyay, Sanjay Ranka, Michael Baudis, Tamer Kahveci: Inferring progression models for CGH data. Bioinformatics 25(17): 2208-2215 (2009)
34		Bin Song, Padmavati Sridhar, Tamer Kahveci, Sanjay Ranka: Double iterative optimisation for metabolic network-based drug target identification. IJDMB 3(2): 124-144 (2009)
33		Ferhat Ay, Tamer Kahveci, Valérie de Crécy-Lagard: A Fast and Accurate Algorithm for Comparative Analysis of metabolic Pathways. J. Bioinformatics and Computational Biology 7(3): 389-428 (2009)
	2008
32		Jun Liu, Sanjay Ranka, Tamer Kahveci: Classification and feature selection algorithms for multi-class CGH data. ISMB 2008: 86-95
31		Padmavati Sridhar, Bin Song, Tamer Kahveci, Sanjay Ranka: Mining Metabolic Networks for Optimal Drug Targets. Pacific Symposium on Biocomputing 2008: 291-302
30		Xuehui Li, Tamer Kahveci, A. Mark Settles: A novel genome-scale repeat finder geared towards transposons. Bioinformatics 24(4): 468-476 (2008)
29		Jayendra Venkateswaran, Tamer Kahveci, Christopher M. Jermaine, Deepak Lachwani: Reference-based indexing for metric spaces with costly distance measures. VLDB J. 17(5): 1231-1251 (2008)
	2007
28		Xu Zhang, Tamer Kahveci: QOMA2: Optimizing the alignment of many sequences. BIBE 2007: 780-787
27		Xuehui Li, Tamer Kahveci: Quality-Based Similarity Search for Biological Sequence Databases. BIOCOMP 2007: 567-573
26		Padmavati Sridhar, Tamer Kahveci, Sanjay Ranka: An Iterative Algorithm for Metabolic Network-Based Drug Target Identification. Pacific Symposium on Biocomputing 2007: 88-99
25		Xu Zhang, Tamer Kahveci: QOMA: quasi-optimal multiple alignment of protein sequences. Bioinformatics 23(2): 162-168 (2007)
24		Jun Liu, Sanjay Ranka, Tamer Kahveci: Markers improve clustering of CGH data. Bioinformatics 23(4): 450-457 (2007)
	2006
23		Jayendra Venkateswaran, Tamer Kahveci, Orhan Çamoglu: Finding Data Broadness Via Generalized Nearest Neighbors. EDBT 2006: 645-663
22		Xu Zhang, Tamer Kahveci: A New Approach for Alignment of Multiple Proteins. Pacific Symposium on Biocomputing 2006: 339-350
21		Jayendra Venkateswaran, Deepak Lachwani, Tamer Kahveci, Christopher M. Jermaine: Reference-based Indexing of Sequence Databases. VLDB 2006: 906-917
20		Jun Liu, Jaaved Mohammed, James Carter, Sanjay Ranka, Tamer Kahveci, Michael Baudis: Distance-based clustering of CGH data. Bioinformatics 22(16): 1971-1978 (2006)
19		Xuehui Li, Tamer Kahveci: A Novel algorithm for identifying low-complexity regions in a protein sequence. Bioinformatics 22(24): 2980-2987 (2006)
	2005
18		Abhijit Pol, Tamer Kahveci: Highly Scalable and Accurate Seeds for Subsequence Alignment. BIBE 2005: 27-31
17		Tamer Kahveci, Venkatakrishnan Ramaswamy, Han Tao, Tao Li: Approximate Global Alignment of Sequences. BIBE 2005: 81-88
16		Yue Li, Tao Li, Tamer Kahveci, José A. B. Fortes: Workload Characterization of Bioinformatics Applications. MASCOTS 2005: 15-22
	2004
15		Arnab Bhattacharya, Tolga Can, Tamer Kahveci, Ambuj K. Singh, Yuan-Fang Wang: ProGreSS: Simultaneous Searching of Protein Databases by Sequence and Structure. Pacific Symposium on Biocomputing 2004: 264-275
14		Tamer Kahveci, Vebjorn Ljosa, Ambuj K. Singh: Speeding up whole-genome alignment by indexing frequency vectors. Bioinformatics 20(13): 2122-2134 (2004)
13		Tamer Kahveci, Ambuj K. Singh: Progressive Searching of Biological Sequences. IEEE Data Eng. Bull. 27(3): 32-39 (2004)
12		Tamer Kahveci, Ambuj K. Singh: Optimizing Similarity Search for Arbitrary Length Time Series Queries. IEEE Trans. Knowl. Data Eng. 16(4): 418-433 (2004)
11		Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh: Index-based Similarity Search for Protein Structure Databases. J. Bioinformatics and Computational Biology 2(1): 99-126 (2004)
	2003
10		Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh: Towards Index-based Similarity Search for Protein Structure Databases. CSB 2003: 148-158
9		Tamer Kahveci, Ambuj K. Singh: Genome on Demand: Interactive Substring Searching. CSB 2003: 551-552
8		Tamer Kahveci, Christian A. Lang, Ambuj K. Singh: Joining Massive High-Dimensional Datasets. ICDE 2003: 265-276
7		Tamer Kahveci, Ambuj K. Singh: Fast alignment of large genome databases. ICDE 2003: 768-770
6		Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh: PSI: indexing protein structures for fast similarity search. ISMB (Supplement of Bioinformatics) 2003: 81-83
5		Tamer Kahveci, Ambuj K. Singh: MAP: Searching Large Genome Databases. Pacific Symposium on Biocomputing 2003: 303-314
	2002
4		Tamer Kahveci, Ambuj K. Singh, Aliekber Gürel: An Efficient Index Structure for Shift and Scale Invariant Search of Multi-Attribute Time Sequences. ICDE 2002: 266
3		Tamer Kahveci, Ambuj K. Singh, Aliekber Gürel: Similarity Searching for Multi-Attribute Sequences. SSDBM 2002: 175-
	2001
2		Tamer Kahveci, Ambuj K. Singh: Variable Length Queries for Time Series Data. ICDE 2001: 273-282
1		Tamer Kahveci, Ambuj K. Singh: Efficient Index Structures for String Databases. VLDB 2001: 351-360

Coauthor Index

1	Ferhat Ay	[33]
2	Nirmalya Bandyopadhyay	[35]
3	Michael Baudis	[20] [35]
4	Arnab Bhattacharya	[15]
5	Orhan Çamoglu	[6] [10] [11] [23]
6	Tolga Can	[15]
7	James Carter	[20]
8	Valérie de Crécy-Lagard	[33]
9	José A. B. Fortes	[16]
10	Aliekber Gürel	[3] [4]
11	Chris Jermaine (Christopher M. Jermaine)	[21] [29]
12	Deepak Lachwani	[21] [29]
13	Christian A. Lang	[8]
14	Tao Li	[16] [17]
15	Xuehui Li	[19] [27] [30]
16	Yue Li	[16]
17	Jun Liu	[20] [24] [32] [35]
18	Vebjorn Ljosa	[14]
19	Jaaved Mohammed	[20]
20	Abhijit Pol	[18]
21	Venkatakrishnan Ramaswamy	[17]
22	Sanjay Ranka	[20] [24] [26] [31] [32] [34] [35]
23	A. Mark Settles	[30]
24	Ambuj K. Singh	[1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15]
25	Bin Song	[31] [34]
26	Padmavati Sridhar	[26] [31] [34]
27	Han Tao	[17]
28	Jayendra Venkateswaran	[21] [23] [29]
29	Yuan-Fang Wang	[15]
30	Xu Zhang	[22] [25] [28]

Colors in the list of coauthors