Stefano Lonardi

	2009
67		Elena Yavorska Harris, Thierry Lecroq, Gregory Kucherov, Stefano Lonardi: CPM's 20th Anniversary: A Statistical Retrospective. CPM 2009: 1-11
66		Serdar Bozdag, Timothy J. Close, Stefano Lonardi: A compartmentalized approach to the assembly of physical maps. BMC Bioinformatics 10: (2009)
	2008
65		Vladimir Vacic, Hailing Jin, Jian-Kang Zhu, Stefano Lonardi: A Probabilistic Model for Small RNA Flowgram Matching. Pacific Symposium on Biocomputing 2008: 75-86
64		Serdar Bozdag, Timothy J. Close, Stefano Lonardi: Computing the Minimal Tiling Path from a Physical Map by Integer Linear Programming. WABI 2008: 148-161
63		Yonghui Wu, Lan Liu, Timothy J. Close, Stefano Lonardi: Deconvoluting BAC-Gene Relationships Using a Physical Map. J. Bioinformatics and Computational Biology 6(3): 603-622 (2008)
62		Yonghui Wu, Stefano Lonardi: A Linear-Time Algorithm for Predicting Functional Annotations from PPI Networks. J. Bioinformatics and Computational Biology 6(6): 1049-1065 (2008)
61		Jake Y. Chen, Mohammed Javeed Zaki, Stefano Lonardi: BIOKDD 2008: a workshop report on data mining in bioinformatics. SIGKDD Explorations 10(2): 51-53 (2008)
60		Raffaele Giancarlo, Stefano Lonardi: Foreword: Special issue in honor of the 60th Birthday of Professor Alberto Apostolico: Work is for people who do not know how to: SAIL - String Algorithms, Information and Learning. Theor. Comput. Sci. 395(2-3): 135-136 (2008)
	2007
59		Serdar Bozdag, Timothy J. Close, Stefano Lonardi: A Compartmentalized Approach to the Assembly of Physical Maps. BIBE 2007: 218-225
58		Scott Sirowy, Yonghui Wu, Stefano Lonardi, Frank Vahid: Two-level microprocessor-accelerator partitioning. DATE 2007: 313-318
57		Scott Sirowy, Yonghui Wu, Stefano Lonardi, Frank Vahid: Clock-frequency assignment for multiple clock domain systems-on-a-chip. DATE 2007: 397-402
56		David Sheldon, Frank Vahid, Stefano Lonardi: Interactive presentation: Soft-core processor customization using the design of experiments paradigm. DATE 2007: 821-826
55		Yonghui Wu, Prasanna Bhat, Timothy J. Close, Stefano Lonardi: Efficient and Accurate Construction of Genetic Linkage Maps from Noisy and Missing Genotyping Data. WABI 2007: 395-406
54		Vladimir Vacic, Vladimir N. Uversky, A. Keith Dunker, Stefano Lonardi: Composition Profiler: a tool for discovery and visualization of amino acid composition differences. BMC Bioinformatics 8: (2007)
53		Eamonn J. Keogh, Stefano Lonardi, Chotirat Ann Ratanamahatana, Li Wei, Sang-Hee Lee, John Handley: Compression-based data mining of sequential data. Data Min. Knowl. Discov. 14(1): 99-129 (2007)
52		Jessica Lin, Eamonn J. Keogh, Li Wei, Stefano Lonardi: Experiencing SAX: a novel symbolic representation of time series. Data Min. Knowl. Discov. 15(2): 107-144 (2007)
51		Stefano Lonardi, Wojciech Szpankowski, Mark Daniel Ward: Error Resilient LZ'77 Data Compression: Algorithms, Analysis, and Experiments. IEEE Transactions on Information Theory 53(5): 1799-1813 (2007)
50		Qiaofeng Yang, Stefano Lonardi: A parallel edge-betweenness clustering tool for Protein-Protein Interaction networks. IJDMB 1(3): 241-247 (2007)
	2006
49		Qiaofeng Yang, Stefano Lonardi, Avraham Melkman: A Compression-Boosting Transform for Two-Dimensional Data. AAIM 2006: 126-137
48		Yonghui Wu, Stefano Lonardi, Wojciech Szpankowski: Error-Resilient LZW Data Compression. DCC 2006: 193-202
47		Eamonn J. Keogh, Li Wei, Xiaopeng Xi, Stefano Lonardi, Jin Shieh, Scott Sirowy: Intelligent Icons: Integrating Lite-Weight Data Mining and Visualization into GUI Operating Systems. ICDM 2006: 912-916
46		Jie Zheng, Jan T. Svensson, Kavitha Madishetty, Timothy J. Close, Tao Jiang, Stefano Lonardi: OligoSpawn: a software tool for the design of overgo probes from large unigene datasets. BMC Bioinformatics 7: 7 (2006)
45		Anthony J. Bagnall, Chotirat (Ann) Ratanamahatana, Eamonn J. Keogh, Stefano Lonardi, Gareth J. Janacek: A Bit Level Representation for Time Series Data Mining with Shape Based Similarity. Data Min. Knowl. Discov. 13(1): 11-40 (2006)
44		Song Lin, Vana Kalogeraki, Dimitrios Gunopulos, Stefano Lonardi: Efficient information compression in sensor networks. IJSNet 1(3/4): 229-240 (2006)
43		Stefano Lonardi, Jessica Lin, Eamonn J. Keogh, Bill Yuan-chi Chiu: Efficient Discovery of Unusual Patterns in Time Series. New Generation Comput. 25(1): 61-93 (2006)
42		Stefano Lonardi, Wojciech Szpankowski, Qiaofeng Yang: Finding biclusters by random projections. Theor. Comput. Sci. 368(3): 217-230 (2006)
	2005
41		Xin Chen, Jie Zheng, Zheng Fu, Peng Nan, Yang Zhong, Stefano Lonardi, Tao Jiang: Computing the Assignment of Orthologous Genes via Genome Rearrangement. APBC 2005: 363-378
40		Jie Zheng, Stefano Lonardi: Discovery of Repetitive Patterns in DNA with Accurate Boundaries. BIBE 2005: 105-112
39		Li Wei, Nitin Kumar, Venkata Nishanth Lolla, Eamonn J. Keogh, Stefano Lonardi, Chotirat (Ann) Ratanamahatana, Helga Van Herle: A Practical Tool for Visualizing and Data Mining Medical Time Series. CBMS 2005: 341-346
38		Qiaofeng Yang, Stefano Lonardi: A Parallel Algorithm for Clustering Protein-Protein Interaction Networks. CSB Workshops 2005: 174-177
37		Song Lin, Dimitrios Gunopulos, Stefano Lonardi, Vana Kalogeraki: Applying LVQ Techniques to Compress Historical Information in Sensor Networks. DCC 2005: 468
36		Qiaofeng Yang, Stefano Lonardi: A Compression-Boosting Transform for 2D Data. DCC 2005: 492
35		Dragomir Yankov, Eamonn J. Keogh, Stefano Lonardi, Ada Wai-Chee Fu: Dot Plots for Time Series Analysis. ICTAI 2005: 159-168
34		Chotirat (Ann) Ratanamahatana, Eamonn J. Keogh, Anthony J. Bagnall, Stefano Lonardi: A Novel Bit Level Time Series Representation with Implication of Similarity Search and Clustering. PAKDD 2005: 771-777
33		Nitin Kumar, Venkata Nishanth Lolla, Eamonn J. Keogh, Stefano Lonardi, Chotirat (Ann) Ratanamahatana: Time-series Bitmaps: a Practical Visualization Tool for Working with Large Time Series Databases. SDM 2005
32		Li Wei, Nitin Kumar, Venkata Nishanth Lolla, Eamonn J. Keogh, Stefano Lonardi, Chotirat (Ann) Ratanamahatana: Assumption-Free Anomaly Detection in Time Series. SSDBM 2005: 237-240
31		Song Lin, Dimitrios Gunopulos, Vana Kalogeraki, Stefano Lonardi: A Data Compression Technique for Sensor Networks with Dynamic Bandwidth Allocation. TIME 2005: 186-188
30		Xin Chen, Jie Zheng, Zheng Fu, Peng Nan, Yang Zhong, Stefano Lonardi, Tao Jiang: Assignment of Orthologous Genes via Genome Rearrangement. IEEE/ACM Trans. Comput. Biology Bioinform. 2(4): 302-315 (2005)
29		Jessica Lin, Eamonn J. Keogh, Stefano Lonardi: Visualizing and discovering non-trivial patterns in large time series databases. Information Visualization 4(2): 61-82 (2005)
28		Li Wei, Eamonn J. Keogh, Xiaopeng Xi, Stefano Lonardi: Integrating Lite-Weight but Ubiquitous Data Mining into GUI Operating Systems. J. UCS 11(11): 1820-1834 (2005)
	2004
27		Eamonn J. Keogh, Jessica Lin, Stefano Lonardi, Bill Yuan-chi Chiu: We Have Seen the Future, and It Is Symbolic. ACSW Frontiers 2004: 83
26		Stefano Lonardi, Wojciech Szpankowski, Qiaofeng Yang: Finding Biclusters by Random Projections. CPM 2004: 102-116
25		Svante Janson, Stefano Lonardi, Wojciech Szpankowski: On the Average Sequence Complexity. CPM 2004: 74-88
24		Stefano Lonardi, Yu Luo: Gridding and Compression of Microarray Images. CSB 2004: 122-130
23		Svante Janson, Stefano Lonardi, Wojciech Szpankowski: On the Average Sequence Complexity. Data Compression Conference 2004: 542
22		Eamonn J. Keogh, Stefano Lonardi, Chotirat (Ann) Ratanamahatana: Towards parameter-free data mining. KDD 2004: 206-215
21		Jessica Lin, Eamonn J. Keogh, Stefano Lonardi, Jeffrey P. Lankford, Donna M. Nystrom: Visually mining and monitoring massive time series. KDD 2004: 460-469
20		Jessica Lin, Eamonn J. Keogh, Stefano Lonardi, Jeffrey P. Lankford, Donna M. Nystrom: VizTree: a Tool for Visually Mining and Monitoring Massive Time Series Databases. VLDB 2004: 1269-1272
19		Jie Zheng, Timothy J. Close, Tao Jiang, Stefano Lonardi: Efficient selection of unique and popular oligos for large EST databases. Bioinformatics 20(13): 2101-2112 (2004)
18		Mikhail J. Atallah, Stefano Lonardi: Augmenting LZ-77 with authentication and integrity assurance capabilities. Concurrency - Practice and Experience 16(11): 1063-1076 (2004)
17		Alberto Apostolico, Fang-Cheng Gong, Stefano Lonardi: Verbumculus and the Discovery of Unusual Words. J. Comput. Sci. Technol. 19(1): 22-41 (2004)
16		Svante Janson, Stefano Lonardi, Wojciech Szpankowski: On average sequence complexity. Theor. Comput. Sci. 326(1-3): 213-227 (2004)
	2003
15		Jie Zheng, Timothy J. Close, Tao Jiang, Stefano Lonardi: Efficient Selection of Unique and Popular Oligos for Large EST Databases. CPM 2003: 384-401
14		Stefano Lonardi, Wojciech Szpankowski: Joint Source-Channel LZ'77 Coding. DCC 2003: 273-282
13		Jessica Lin, Eamonn J. Keogh, Stefano Lonardi, Bill Yuan-chi Chiu: A symbolic representation of time series, with implications for streaming algorithms. DMKD 2003: 2-11
12		Bill Yuan-chi Chiu, Eamonn J. Keogh, Stefano Lonardi: Probabilistic discovery of time series motifs. KDD 2003: 493-498
11		Mikhail J. Atallah, Stefano Lonardi: Authentication of LZ-77 Compressed Data. SAC 2003: 282-287
10		Alberto Apostolico, Mary Ellen Bock, Stefano Lonardi: Monotony of Surprise and Large-Scale Quest for Unusual Words. Journal of Computational Biology 10(3/4): 283-311 (2003)
	2002
9		Concettina Guerra, Stefano Lonardi, Giuseppe Zanotti: Analysis of Secondary Structure Elements of Proteins Using Indexing Techniques. 3DPVT 2002: 812-823
8		Pranav Patel, Eamonn J. Keogh, Jessica Lin, Stefano Lonardi: Mining Motifs in Massive Time Series Databases. ICDM 2002: 370-377
7		Eamonn J. Keogh, Stefano Lonardi, Bill Yuan-chi Chiu: Finding surprising patterns in a time series database in linear time and space. KDD 2002: 550-556
6		Alberto Apostolico, Mary Ellen Bock, Stefano Lonardi: Monotony of surprise and large-scale quest for unusual words. RECOMB 2002: 22-31
5		Alberto Apostolico, Stefano Lonardi: A speed-up for the commute between subword trees and DAWGs. Inf. Process. Lett. 83(3): 159-161 (2002)
	2000
4		Alberto Apostolico, Stefano Lonardi: Compression of Biological Sequences by Greedy Off-Line Textual Substitution. Data Compression Conference 2000: 143-152
3		Alberto Apostolico, Mary Ellen Bock, Stefano Lonardi, Xuyan Xu: Efficient Detection of Unusual Words. Journal of Computational Biology 7(1-2): 71-94 (2000)
	1999
2		Alberto Apostolico, Mary Ellen Bock, Stefano Lonardi: Linear Global Detectors of Redundant and Rare Substrings. Data Compression Conference 1999: 168-177
	1998
1		Alberto Apostolico, Stefano Lonardi: Some Theory and Practice of Greedy Off-Line Textual Substitution. Data Compression Conference 1998: 119-128

Coauthor Index

1	Alberto Apostolico	[1] [2] [3] [4] [5] [6] [10] [17]
2	Mikhail J. Atallah	[11] [18]
3	Anthony J. Bagnall	[34] [45]
4	Prasanna Bhat	[55]
5	Mary Ellen Bock	[2] [3] [6] [10]
6	Serdar Bozdag	[59] [64] [66]
7	Jake Y. Chen	[61]
8	Xin Chen	[30] [41]
9	Bill Yuan-chi Chiu	[7] [12] [13] [27] [43]
10	Timothy J. Close	[15] [19] [46] [55] [59] [63] [64] [66]
11	A. Keith Dunker	[54]
12	Ada Wai-Chee Fu	[35]
13	Zheng Fu	[30] [41]
14	Raffaele Giancarlo	[60]
15	Fang-Cheng Gong	[17]
16	Concettina Guerra	[9]
17	Dimitrios Gunopulos	[31] [37] [44]
18	John Handley	[53]
19	Elena Yavorska Harris	[67]
20	Helga Van Herle	[39]
21	Gareth J. Janacek	[45]
22	Svante Janson	[16] [23] [25]
23	Tao Jiang	[15] [19] [30] [41] [46]
24	Hailing Jin	[65]
25	Vana Kalogeraki	[31] [37] [44]
26	Eamonn J. Keogh	[7] [8] [12] [13] [20] [21] [22] [27] [28] [29] [32] [33] [34] [35] [39] [43] [45] [47] [52] [53]
27	Gregory Kucherov	[67]
28	Nitin Kumar	[32] [33] [39]
29	Jeffrey P. Lankford	[20] [21]
30	Thierry Lecroq	[67]
31	Sang-Hee Lee	[53]
32	Jessica Lin	[8] [13] [20] [21] [27] [29] [43] [52]
33	Song Lin	[31] [37] [44]
34	Lan Liu	[63]
35	Venkata Nishanth Lolla	[32] [33] [39]
36	Yu Luo	[24]
37	Kavitha Madishetty	[46]
38	Avraham Melkman	[49]
39	Peng Nan	[30] [41]
40	Donna M. Nystrom	[20] [21]
41	Pranav Patel	[8]
42	Chotirat (Ann) Ratanamahatana (Chotirat Ann Ratanamahatana)	[22] [32] [33] [34] [39] [45] [53]
43	David Sheldon	[56]
44	Jin Shieh	[47]
45	Scott Sirowy	[47] [57] [58]
46	Jan T. Svensson	[46]
47	Wojciech Szpankowski	[14] [16] [23] [25] [26] [42] [48] [51]
48	Vladimir N. Uversky	[54]
49	Vladimir Vacic	[54] [65]
50	Frank Vahid	[56] [57] [58]
51	Mark Daniel Ward	[51]
52	Li Wei	[28] [32] [39] [47] [52] [53]
53	Yonghui Wu	[48] [55] [57] [58] [62] [63]
54	Xiaopeng Xi	[28] [47]
55	Xuyan Xu	[3]
56	Qiaofeng Yang	[26] [36] [38] [42] [49] [50]
57	Dragomir Yankov	[35]
58	Mohammed Javeed Zaki (Mohammed J. Zaki)	[61]
59	Giuseppe Zanotti	[9]
60	Jie Zheng	[15] [19] [30] [40] [41] [46]
61	Yang Zhong	[30] [41]
62	Jian-Kang Zhu	[65]

Colors in the list of coauthors