Joachim Selbig

	2009
36		Pawel Durek, Christian Schudoma, Wolfram Weckwerth, Joachim Selbig, Dirk Walther: Detection and characterization of 3D-signature phosphorylation site motifs and their contribution towards improved phosphorylation site prediction in proteins. BMC Bioinformatics 10: (2009)
	2008
35		Zoran Nikoloski, Sergio Grimbs, Joachim Selbig, Oliver Ebenhöh: Hardness and Approximability of the Inverse Scope Problem. WABI 2008: 99-112
34		Steve Dworschak, Susanne Grell, Victoria J. Nikiforova, Torsten Schaub, Joachim Selbig: Modeling Biological Networks by Action Languages via Answer Set Programming. Constraints 13(1-2): 21-65 (2008)
33		Joshua L. Heazlewood, Pawel Durek, Jan Hummel, Joachim Selbig, Wolfram Weckwerth, Dirk Walther, Waltraud X. Schulze: PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor. Nucleic Acids Research 36(Database-Issue): 1015-1021 (2008)
	2007
32		Claudia Falter, Alexander Schliep, Joachim Selbig, Martin Vingron, Dirk Walther: Proceedings of the German Conference on Bioinformatics, GCB 2007, September 26-28, 2007, Potsdam, Germany. GI 2007
31		Jan Hummel, Michaela Niemann, Stefanie Wienkoop, Waltraud X. Schulze, Dirk Steinhauser, Joachim Selbig, Dirk Walther, Wolfram Weckwerth: ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites. BMC Bioinformatics 8: (2007)
30		Henning Redestig, Daniel Weicht, Joachim Selbig, Matthew A. Hannah: Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana. BMC Bioinformatics 8: (2007)
29		Ralf Steuer, Adriano Nunes Nesi, Alisdair R. Fernie, Thilo Gross, Bernd Blasius, Joachim Selbig: From structure to dynamics of metabolic pathways: application to the plant mitochondrial TCA cycle. Bioinformatics 23(11): 1378-1385 (2007)
28		Wolfram Stacklies, Henning Redestig, Matthias Scholz, Dirk Walther, Joachim Selbig: pcaMethods - a bioconductor package providing PCA methods for incomplete data. Bioinformatics 23(9): 1164-1167 (2007)
	2006
27		Kirsten Roomp, Niko Beerenwinkel, Tobias Sing, Eugen Schülter, Joachim Büch, Saleta Sierra-Aragon, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig: Arevir: A Secure Platform for Designing Personalized Antiretroviral Therapies Against HIV. DILS 2006: 185-194
26		Henning Redestig, Florian Sohler, Ralf Zimmer, Joachim Selbig: Unsupervised Decision Trees Structured by Gene Ontology (GO-UDTs) for the Interpretation of Microarray Data. GfKl 2006: 585-592
25		Susanne Grell, Torsten Schaub, Joachim Selbig: Modelling Biological Networks by Action Languages Via Answer Set Programming. ICLP 2006: 285-299
24		Ralf Steuer, Peter Humburg, Joachim Selbig: Validation and functional annotation of expression-based clusters based on gene ontology. BMC Bioinformatics 7: 380 (2006)
23		Matthias Steinfath, Dirk Repsilber, Manuela Hische, Nicolas Schauer, Alisdair R. Fernie, Joachim Selbig: Metabolite profiles as a reflection of physiological status -- a methodological validation. J. Integrative Bioinformatics 3(2): (2006)
	2005
22		Jan Hummel, Nima Keshvari, Wolfram Weckwerth, Joachim Selbig: Species-specific analysis of protein sequence motifs using mutual information. BMC Bioinformatics 6: 164 (2005)
21		Matthias Scholz, Fatma Kaplan, Charles L. Guy, Joachim Kopka, Joachim Selbig: Non-linear PCA: a missing data approach. Bioinformatics 21(20): 3887-3895 (2005)
20		Niko Beerenwinkel, Tobias Sing, Thomas Lengauer, Jörg Rahnenführer, Kirsten Roomp, Igor Savenkov, Roman Fischer, Daniel Hoffmann, Joachim Selbig, Klaus Korn, Hauke Walter, Thomas Berg, Patrick Braun, Gerd Fätkenheuer, Mark Oette, Jürgen K. Rockstroh, Bernd Kupfer, Rolf Kaiser, Martin Däumer: Computational methods for the design of effective therapies against drug resistant HIV strains. Bioinformatics 21(21): 3943-3950 (2005)
19		Niko Beerenwinkel, Jörg Rahnenführer, Rolf Kaiser, Daniel Hoffmann, Joachim Selbig, Thomas Lengauer: Mtreemix: a software package for learning and using mixture models of mutagenetic trees. Bioinformatics 21(9): 2106-2107 (2005)
18		Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning Multiple Evolutionary Pathways from Cross-Sectional Data. Journal of Computational Biology 12(6): 584-598 (2005)
	2004
17		Matthias Scholz, Yves Gibon, Mark Stitt, Joachim Selbig: Independent components analysis of starch deficient pgm mutants. German Conference on Bioinformatics 2004: 95-104
16		Niko Beerenwinkel, Jörg Rahnenführer, Martin Däumer, Daniel Hoffmann, Rolf Kaiser, Joachim Selbig, Thomas Lengauer: Learning multiple evolutionary pathways from cross-sectional data. RECOMB 2004: 36-44
15		Carsten O. Daub, Ralf Steuer, Joachim Selbig, Sebastian Kloska: Estimating mutual information using B-spline functions - an improved similarity measure for analysing gene expression data. BMC Bioinformatics 5: 118 (2004)
14		André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig: Threshold extraction in metabolite concentration data. Bioinformatics 20(10): 1491-1494 (2004)
13		Dirk Steinhauser, Björn H. Junker, Alexander Lüdemann, Joachim Selbig, Joachim Kopka: Hypothesis-driven approach to predict transcriptional units from gene expression data. Bioinformatics 20(12): 1928-1939 (2004)
12		Matthias Scholz, S. Gatzek, A. Sterling, Oliver Fiehn, Joachim Selbig: Metabolite fingerprinting: detecting biological features by independent component analysis. Bioinformatics 20(15): 2447-2454 (2004)
11		Alexander Lüdemann, Daniel Weicht, Joachim Selbig, Joachim Kopka: PaVESy: Pathway Visualization and Editing System. Bioinformatics 20(16): 2841-2844 (2004)
	2003
10		André Flöter, Jacques Nicolas, Torsten Schaub, Joachim Selbig: Threshold extraction in metabolite concentration data. German Conference on Bioinformatics 2003: 33-39
9		Niko Beerenwinkel, Thomas Lengauer, Martin Däumer, Rolf Kaiser, Hauke Walter, Klaus Korn, Daniel Hoffmann, Joachim Selbig: Methods for optimizing antiviral combination therapies. ISMB (Supplement of Bioinformatics) 2003: 16-25
8		Carsten O. Daub, Sebastian Kloska, Joachim Selbig: MetaGeneAlyse: analysis of integrated transcriptional and metabolite data. Bioinformatics 19(17): 2332-2333 (2003)
7		Niko Beerenwinkel, Martin Däumer, Mark Oette, Klaus Korn, Daniel Hoffmann, Rolf Kaiser, Thomas Lengauer, Joachim Selbig, Hauke Walter: Geno2pheno: estimating phenotypic drug resistance from HIV-1 genotypes. Nucleic Acids Research 31(13): 3850-3855 (2003)
	2002
6		Ralph E. Steuer, Jürgen Kurths, Carsten O. Daub, Janko Weise, Joachim Selbig: The mutual information: Detecting and evaluating dependencies between variables. ECCB 2002: 231-240
	2001
5		Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Identifying drug resistance-associated patterns in HIV genotypes. German Conference on Bioinformatics 2001: 126-130
4		Niko Beerenwinkel, Barbara Schmidt, Hauke Walter, Rolf Kaiser, Thomas Lengauer, Daniel Hoffmann, Klaus Korn, Joachim Selbig: Geno2pheno: Interpreting Genotypic HIV Drug Resistance Tests. IEEE Intelligent Systems 16(6): 35-41 (2001)
	1999
3		Joachim Selbig, Heinz-Theodor Mevissen, Thomas Lengauer: Decision tree-based formation of consensus protein secondary structure prediction. Bioinformatics 15(12): 1039-1046 (1999)
	1986
2		Joachim Selbig: Knowledge Acquisition by Inductive Learning from Examples. AII 1986: 145-163
	1981
1		Fritz Wysotzki, Werner Kolbe, Joachim Selbig: Concept Learning by Structured Examples - An Algebraic Approach. IJCAI 1981: 153-158

Coauthor Index

1	Niko Beerenwinkel	[4] [5] [7] [9] [16] [18] [19] [20] [27]
2	Thomas Berg	[20]
3	Bernd Blasius	[29]
4	Patrick Braun	[20]
5	Joachim Büch	[27]
6	Carsten O. Daub	[6] [8] [15]
7	Martin Däumer	[7] [9] [16] [18] [20] [27]
8	Pawel Durek	[33] [36]
9	Steve Dworschak	[34]
10	Oliver Ebenhöh	[35]
11	Claudia Falter	[32]
12	Gerd Fätkenheuer	[20]
13	Alisdair R. Fernie	[23] [29]
14	Oliver Fiehn	[12]
15	Roman Fischer	[20]
16	André Flöter	[10] [14]
17	S. Gatzek	[12]
18	Yves Gibon	[17]
19	Susanne Grell	[25] [34]
20	Sergio Grimbs	[35]
21	Thilo Gross	[29]
22	Charles L. Guy	[21]
23	Matthew A. Hannah	[30]
24	Joshua L. Heazlewood	[33]
25	Manuela Hische	[23]
26	Daniel Hoffmann	[4] [5] [7] [9] [16] [18] [19] [20] [27]
27	Peter Humburg	[24]
28	Jan Hummel	[22] [31] [33]
29	Björn H. Junker	[13]
30	Rolf Kaiser	[4] [5] [7] [9] [16] [18] [19] [20] [27]
31	Fatma Kaplan	[21]
32	Nima Keshvari	[22]
33	Sebastian Kloska	[8] [15]
34	Werner Kolbe	[1]
35	Joachim Kopka	[11] [13] [21]
36	Klaus Korn	[4] [5] [7] [9] [20]
37	Bernd Kupfer	[20]
38	Jürgen Kurths	[6]
39	Thomas Lengauer	[3] [4] [5] [7] [9] [16] [18] [19] [20] [27]
40	Alexander Lüdemann	[11] [13]
41	Heinz-Theodor Mevissen	[3]
42	Adriano Nunes Nesi	[29]
43	Jacques Nicolas	[10] [14]
44	Michaela Niemann	[31]
45	Victoria J. Nikiforova	[34]
46	Zoran Nikoloski	[35]
47	Mark Oette	[7] [20]
48	Jörg Rahnenführer	[16] [18] [19] [20]
49	Henning Redestig	[26] [28] [30]
50	Dirk Repsilber	[23]
51	Jürgen K. Rockstroh	[20]
52	Kirsten Roomp	[20] [27]
53	Igor Savenkov	[20]
54	Torsten Schaub	[10] [14] [25] [34]
55	Nicolas Schauer	[23]
56	Alexander Schliep	[32]
57	Barbara Schmidt	[4] [5]
58	Matthias Scholz	[12] [17] [21] [28]
59	Christian Schudoma	[36]
60	Eugen Schülter	[27]
61	Waltraud X. Schulze	[31] [33]
62	Saleta Sierra-Aragon	[27]
63	Tobias Sing	[20] [27]
64	Florian Sohler	[26]
65	Wolfram Stacklies	[28]
66	Matthias Steinfath	[23]
67	Dirk Steinhauser	[13] [31]
68	A. Sterling	[12]
69	Ralf Steuer	[15] [24] [29]
70	Ralph E. Steuer	[6]
71	Mark Stitt	[17]
72	Martin Vingron	[32]
73	Hauke Walter	[4] [5] [7] [9] [20]
74	Dirk Walther	[28] [31] [32] [33] [36]
75	Wolfram Weckwerth	[22] [31] [33] [36]
76	Daniel Weicht	[11] [30]
77	Janko Weise	[6]
78	Stefanie Wienkoop	[31]
79	Fritz Wysotzki	[1]
80	Ralf Zimmer	[26]

Colors in the list of coauthors