2009 | ||
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30 | Yong Lu, Roni Rosenfeld, Gerard J. Nau, Ziv Bar-Joseph: Cross Species Expression Analysis of Innate Immune Response. RECOMB 2009: 90-107 | |
29 | Manfred Lau, Ziv Bar-Joseph, James Kuffner: Modeling spatial and temporal variation in motion data. ACM Trans. Graph. 28(5): (2009) | |
28 | Yong Lu, Peter Huggins, Ziv Bar-Joseph: Cross species analysis of microarray expression data. Bioinformatics 25(12): 1476-1483 (2009) | |
2008 | ||
27 | Tien-ho Lin, Naftali Kaminski, Ziv Bar-Joseph: Alignment and classification of time series gene expression in clinical studies. ISMB 2008: 147-155 | |
26 | Yanjun Qi, Fernanda Balem, Christos Faloutsos, Judith Klein-Seetharaman, Ziv Bar-Joseph: Protein complex identification by supervised graph local clustering. ISMB 2008: 250-268 | |
25 | Yanxin Shi, Itamar Simon, Tom Mitchell, Ziv Bar-Joseph: A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors. RECOMB 2008: 82-97 | |
24 | Anupam Gupta, Ziv Bar-Joseph: Extracting Dynamics from Static Cancer Expression Data. IEEE/ACM Trans. Comput. Biology Bioinform. 5(2): 172-182 (2008) | |
2007 | ||
23 | Yanxin Shi, Michael Klustein, Itamar Simon, Tom Mitchell, Ziv Bar-Joseph: Continuous hidden process model for time series expression experiments. ISMB/ECCB (Supplement of Bioinformatics) 2007: 459-467 | |
22 | Yanjun Qi, Judith Klein-Seetharaman, Ziv Bar-Joseph: A mixture of feature experts approach for protein-protein interaction prediction. BMC Bioinformatics 8(S-10): (2007) | |
21 | Yanxin Shi, Tom Mitchell, Ziv Bar-Joseph: Inferring pairwise regulatory relationships from multiple time series datasets. Bioinformatics 23(6): 755-763 (2007) | |
20 | Naftali Kaminski, Ziv Bar-Joseph: A Patient-Gene Model for Temporal Expression Profiles in Clinical Studies. Journal of Computational Biology 14(3): 324-338 (2007) | |
2006 | ||
19 | Yong Lu, Ronald Rosenfeld, Ziv Bar-Joseph: Identifying cycling genes by combining sequence homology and expression data. ISMB (Supplement of Bioinformatics) 2006: 314-322 | |
18 | Naftali Kaminski, Ziv Bar-Joseph: A Patient-Gene Model for Temporal Expression Profiles in Clinical Studies. RECOMB 2006: 69-82 | |
17 | Jason Ernst, Ziv Bar-Joseph: STEM: a tool for the analysis of short time series gene expression data. BMC Bioinformatics 7: 191 (2006) | |
2005 | ||
16 | Rohit Singh, Nathan Palmer, David K. Gifford, Bonnie Berger, Ziv Bar-Joseph: Active learning for sampling in time-series experiments with application to gene expression analysis. ICML 2005: 832-839 | |
15 | Jason Ernst, Gerard J. Nau, Ziv Bar-Joseph: Clustering short time series gene expression data. ISMB (Supplement of Bioinformatics) 2005: 159-168 | |
14 | Yanjun Qi, Judith Klein-Seetharaman, Ziv Bar-Joseph: Random Forest Similarity for Protein-Protein Interaction Prediction from Multiple Sources. Pacific Symposium on Biocomputing 2005 | |
2004 | ||
13 | Ziv Bar-Joseph, Shlomit Farkash, David K. Gifford, Itamar Simon, Roni Rosenfeld: Deconvolving cell cycle expression data with complementary information. ISMB/ECCB (Supplement of Bioinformatics) 2004: 23-30 | |
12 | Ziv Bar-Joseph: Analyzing time series gene expression data. Bioinformatics 20(16): 2493-2503 (2004) | |
2003 | ||
11 | Ziv Bar-Joseph, Erik D. Demaine, David K. Gifford, Nathan Srebro, Angèle M. Hamel, Tommi Jaakkola: K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data. Bioinformatics 19(9): 1070-1078 (2003) | |
10 | Ziv Bar-Joseph, Daniel Cohen-Or: Hierarchical Context-based Pixel Ordering. Comput. Graph. Forum 22(3): 349-358 (2003) | |
9 | Ziv Bar-Joseph, Georg Gerber, David K. Gifford, Tommi Jaakkola, Itamar Simon: Continuous Representations of Time-Series Gene Expression Data. Journal of Computational Biology 10(3/4): 341-356 (2003) | |
2002 | ||
8 | Ziv Bar-Joseph, Idit Keidar, Nancy A. Lynch: Early-Delivery Dynamic Atomic Broadcast. DISC 2002: 1-16 | |
7 | Ziv Bar-Joseph, Georg Gerber, David K. Gifford, Tommi Jaakkola, Itamar Simon: A new approach to analyzing gene expression time series data. RECOMB 2002: 39-48 | |
6 | Ziv Bar-Joseph, Erik D. Demaine, David K. Gifford, Angèle M. Hamel, Tommi Jaakkola, Nathan Srebro: K-ary Clustering with Optimal Leaf Ordering for Gene Expression Data. WABI 2002: 506-520 | |
5 | Shlomo Dubnov, Ziv Bar-Joseph, Ran El-Yaniv, Dani Lischinski, Michael Werman: Synthesizing Sound Textures through Wavelet Tree Learning. IEEE Computer Graphics and Applications 22(4): 38-48 (2002) | |
2001 | ||
4 | Ziv Bar-Joseph, David K. Gifford, Tommi Jaakkola: Fast optimal leaf ordering for hierarchical clustering. ISMB (Supplement of Bioinformatics) 2001: 22-29 | |
3 | Ziv Bar-Joseph, Ran El-Yaniv, Dani Lischinski, Michael Werman: Texture Mixing and Texture Movie Synthesis Using Statistical Learning. IEEE Trans. Vis. Comput. Graph. 7(2): 120-135 (2001) | |
2000 | ||
2 | Ziv Bar-Joseph, Idit Keidar, Tal Anker, Nancy A. Lynch: Totally Ordered Multicast with Bounded Delays and Variable Rates. OPODIS 2000: 143-162 | |
1998 | ||
1 | Ziv Bar-Joseph, Michael Ben-Or: A Tight Lower Bound for Randomized Synchronous Consensus. PODC 1998: 193-199 |