| 2008 |
14 | | Yanjun Qi,
Fernanda Balem,
Christos Faloutsos,
Judith Klein-Seetharaman,
Ziv Bar-Joseph:
Protein complex identification by supervised graph local clustering.
ISMB 2008: 250-268 |
13 | | Naveena Yanamala,
Kalyan C. Tirupula,
Judith Klein-Seetharaman:
Preferential binding of allosteric modulators to active and inactive conformational states of metabotropic glutamate receptors.
BMC Bioinformatics 9(S-1): (2008) |
12 | | Madhavi Ganapathiraju,
Narayanas Balakrishnan,
Raj Reddy,
Judith Klein-Seetharaman:
Transmembrane helix prediction using amino acid property features and latent semantic analysis.
BMC Bioinformatics 9(S-1): (2008) |
| 2007 |
11 | | Yanjun Qi,
Judith Klein-Seetharaman,
Ziv Bar-Joseph:
A mixture of feature experts approach for protein-protein interaction prediction.
BMC Bioinformatics 8(S-10): (2007) |
10 | | Madhavi Ganapathiraju,
Christopher Jon Jursa,
Hassan A. Karimi,
Judith Klein-Seetharaman:
TMpro web server and web service: transmembrane helix prediction through amino acid property analysis.
Bioinformatics 23(20): 2795-2796 (2007) |
| 2005 |
9 | | Betty Yee Man Cheng,
Jaime G. Carbonell,
Judith Klein-Seetharaman:
A Machine Text-Inspired Machine Learning Approach for Identification of Transmembrane Helix Boundaries.
ISMIS 2005: 29-37 |
8 | | Yanjun Qi,
Judith Klein-Seetharaman,
Ziv Bar-Joseph:
Random Forest Similarity for Protein-Protein Interaction Prediction from Multiple Sources.
Pacific Symposium on Biocomputing 2005 |
7 | | Yang Cai,
Ingo Snel,
Betty Cheng,
B. Suman Bharathi,
Clementine Klein,
Judith Klein-Seetharaman:
BioSim--a biomedical character-based problem solving environment.
Future Generation Comp. Syst. 21(7): 1145-1156 (2005) |
| 2004 |
6 | | Madhavi Ganapathiraju,
Narayanas Balakrishnan,
Raj Reddy,
Judith Klein-Seetharaman:
Computational Biology and Language.
Ambient Intelligence for Scientific Discovery 2004: 25-47 |
5 | | Yang Cai,
Judith Klein-Seetharaman:
Ambient intelligence for scientific discovery.
CHI Extended Abstracts 2004: 1705-1706 |
4 | | Deborah K. Weisser,
Judith Klein-Seetharaman:
Identification of fundamental building blocks in protein sequences using statistical association measures.
SAC 2004: 154-161 |
3 | | Yan Liu,
Jaime G. Carbonell,
Judith Klein-Seetharaman,
Vanathi Gopalakrishnan:
Context sensitive vocabulary and its application in protein secondary structure prediction.
SIGIR 2004: 538-539 |
2 | | Yan Liu,
Jaime G. Carbonell,
Judith Klein-Seetharaman,
Vanathi Gopalakrishnan:
Comparison of probabilistic combination methods for protein secondary structure prediction.
Bioinformatics 20(17): 3099-3107 (2004) |
| 2003 |
1 | | Yang Cai,
Ingo Snel,
B. Suman Bharathi,
Clementine Klein,
Judith Klein-Seetharaman:
Towards Biomedical Problem Solving in a Game Environment.
International Conference on Computational Science 2003: 1005-1014 |