Daniel P. Miranker

Dan Miranker

	2009
62		Smriti R. Ramakrishnan, Christine Vogel, John T. Prince, Rong Wang, Zhihua Li, Luiz O. Penalva, Margaret Myers, Edward M. Marcotte, Daniel P. Miranker: Integrating shotgun proteomics and mRNA expression data to improve protein identification. Bioinformatics 25(11): 1397-1403 (2009)
61		Smriti R. Ramakrishnan, Christine Vogel, Taejoon Kwon, Luiz O. Penalva, Edward M. Marcotte, Daniel P. Miranker: Mining gene functional networks to improve mass-spectrometry-based protein identification. Bioinformatics 25(22): 2955-2961 (2009)
	2008
60		Syed Hamid Tirmizi, Juan Sequeda, Daniel P. Miranker: Translating SQL Applications to the Semantic Web. DEXA 2008: 450-464
59		Daniel P. Miranker: Evolving models of biological sequence similarity. ICDE Workshops 2008: 301-307
58		Weijia Xu, Daniel P. Miranker, Rui Mao, Smriti R. Ramakrishnan: Anytime k-nearest neighbor search for database applications. ICDE Workshops 2008: 426-435
57		Juan Sequeda, Syed Hamid Tirmizi, Daniel P. Miranker: A Bootstrapping Architecture for Integration of Relational Databases to the Semantic Web. International Semantic Web Conference (Posters & Demos) 2008
56		Weijia Xu, Daniel P. Miranker, Rui Mao, Smriti R. Ramakrishnan: Anytime K-Nearest Neighbor Search for Database Applications. SISAP 2008: 139-148
55		Daniel P. Miranker: Evolving Models of Biological Sequence Similarity. SISAP 2008: 3-9
54		Sapna Bafna, Julian Humphries, Daniel P. Miranker: Schema driven assignment and implementation of life science identifiers (LSIDs). Journal of Biomedical Informatics 41(5): 730-738 (2008)
	2007
53		Xochitl C. Morgan, Shulin Ni, Daniel P. Miranker, Vishwanath R. Iyer: Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining. BMC Bioinformatics 8: (2007)
52		Shu Wang, Robin Ray Gutell, Daniel P. Miranker: Biclustering as a method for RNA local multiple sequence alignment. Bioinformatics 23(24): 3289-3296 (2007)
51		François Barbançon, Daniel P. Miranker: SPHINX: Schema integration by example. J. Intell. Inf. Syst. 29(2): 145-184 (2007)
	2006
50		Weijia Xu, Rui Mao, Shu Wang, Daniel P. Miranker: On Integrating Peptide Sequence Analysis and Relational Distance-Based Indexing. BIBE 2006: 27-34
49		Smriti R. Ramakrishnan, Rui Mao, Aleksey A. Nakorchevskiy, John T. Prince, Willard S. Willard, Weijia Xu, Edward M. Marcotte, Daniel P. Miranker: A fast coarse filtering method for peptide identification by mass spectrometry. Bioinformatics 22(12): 1524-1531 (2006)
	2005
48		Rui Mao, Wenguo Liu, Daniel P. Miranker, Qasim Iqbal: Case Study: Distance-Based Image Retrieval in the MoBIoS DBMS. CIT 2005: 49-57
47		Rui Mao, Weijia Xu, Smriti R. Ramakrishnan, Glen Nuckolls, Daniel P. Miranker: On Optimizing Distance-Based Similarity Search for Biological Databases. CSB 2005: 351-361
46		Rui Mao, Weijia Xu, Neha Singh, Daniel P. Miranker: An Assessment of a Metric Space Database Index to Support Sequence Homology. International Journal on Artificial Intelligence Tools 14(5): 867-885 (2005)
	2004
45		François Barbançon, Daniel P. Miranker: Interactive Schema Integration with Sphinx. FQAS 2004: 175-190
44		Weijia Xu, Willard J. Briggs, Joanna Padolina, Ruth E. Timme, Wenguo Liu, C. Randal Linder, Daniel P. Miranker: Using MoBIoS' scalable genome join to find conserved primer pair candidates between two genomes. ISMB/ECCB (Supplement of Bioinformatics) 2004: 355-362
43		Weijia Xu, Daniel P. Miranker: A metric model of amino acid substitution. Bioinformatics 20(18): 3716-3716 (2004)
42		Weijia Xu, Daniel P. Miranker: A metric model of amino acid substitution. Bioinformatics 20(8): 1214-1221 (2004)
41		Daniel P. Miranker, Willard J. Briggs, Rui Mao, Shulin Ni, Weijia Xu: Biosequence Use Cases in MoBIoS SQL. IEEE Data Eng. Bull. 27(3): 3-11 (2004)
	2003
40		Luay Nakhleh, Daniel P. Miranker, François Barbançon, William H. Piel, Michael J. Donoghue: Requirements of Phylogenetic Databases. BIBE 2003: 141-148
39		Rui Mao, Weijia Xu, Neha Singh, Daniel P. Miranker: An Assessment of a Metric Space Database Index to Support Sequence Homology. BIBE 2003: 375-
38		Daniel P. Miranker, Weijia Xu, Rui Mao: MoBIoS: A Metric-Space DBMS to Support Biological Discovery. SSDBM 2003: 241-244
37		Daniel P. Miranker: Metric-Space Indexes as a Basis for Scalable Biological Databases. OMICS 7(1): 57-60 (2003)
	2002
36		François Barbançon, Daniel P. Miranker: Implementing Federated Databases Systems by Compiling SchemaSQL. IDEAS 2002: 192-201
35		Daniel P. Miranker, Malcolm C. Taylor, Anand Padmanaban: A Tractable Query Cache by Approximation. SARA 2002: 140-151
34		Joseph M. Hellerstein, Elias Koutsoupias, Daniel P. Miranker, Christos H. Papadimitriou, Vasilis Samoladas: On a model of indexability and its bounds for range queries. J. ACM 49(1): 35-55 (2002)
	1999
33		Lane Warshaw, Daniel P. Miranker: Rule-Based Query Optimization, Revisited. CIKM 1999: 267-275
	1998
32		Vasilis Samoladas, Daniel P. Miranker: A Lower Bound Theorem for Indexing Schemes and Its Application to Multidimensional Range Queries. PODS 1998: 44-51
	1997
31		Daniel P. Miranker, Roberto J. Bayardo Jr., Vasilis Samoladas: Query Evaluation as Constraint Search; An Overview of Early Results. CDB 1997: 53-63
30		Lance Obermeyer, Daniel P. Miranker: Evaluating Triggers Using Decision Trees. CIKM 1997: 144-150
29		Daniel P. Miranker, Vasilis Samoladas: Alamo: An Architecture for Integrating Heterogeneous Data Sources. KRDB 1997: 14.1-14.8
	1996
28		Roberto J. Bayardo Jr., Daniel P. Miranker: A Complexity Analysis of Space-Bounded Learning Algorithms for the Constraint Satisfaction Problem. AAAI/IAAI, Vol. 1 1996: 298-304
27		Lane Warshaw, Daniel P. Miranker: A Case Study of Venus and a Declarative Basis for Rule Modules. CIKM 1996: 317-325
26		Roberto J. Bayardo Jr., Daniel P. Miranker: Processing Queries for First Few Answers. CIKM 1996: 45-52
25		Daniel P. Miranker, Lance Obermeyer: An Overview of the VenusDB Active Multidatabase System. CODAS 1996: 108-117
24		Shiow-yang Wu, Daniel P. Miranker, James C. Browne: Decomposition Abstraction in Parallel Rule Languages. IEEE Trans. Parallel Distrib. Syst. 7(11): 1164-1184 (1996)
	1995
23		Stephen Correl, Daniel P. Miranker: On Isolation, Concurrency, and the Venus Rule Language. CIKM 1995: 281-289
22		Roberto J. Bayardo Jr., Daniel P. Miranker: On the Space-Time Trade-off in Solving Constraint Satisfaction Problems. IJCAI 1995: 558-562
	1994
21		David Gadbois, Daniel P. Miranker: Discovering Procedural Executions of Rule-Based Programs. AAAI 1994: 459-464
20		Shiow-yang Wu, Daniel P. Miranker, James C. Browne: Toward Semantic-Based Parallelism in Production Systems. ICPADS 1994: 752-758
19		James C. Browne, E. Allen Emerson, Mohamed G. Gouda, Daniel P. Miranker, Aloysius K. Mok, Roberto J. Bayardo Jr., Sarah E. Chodrow, David Gadbois, F. Furman Haddix, Thomas W. Hetherington, Lance Obermeyer, Duu-Chung Tsou, Chih-Kan Wang, Rwo-Hsi Wang: A New Approach to Modularity in Rule-Based Programming. ICTAI 1994: 18-25
18		Roberto J. Bayardo Jr., Daniel P. Miranker: An Optimal Backtrack Algorithm for Tree-Structured Constraint Satisfaction problems. Artif. Intell. 71(1): 159-181 (1994)
17		François Pachet, Patrick Albert, Brian M. Barry, Brian Donnell, John McGehee, Dan Miranker: Embedded object-oriented production systems (OOPS): workshop report. OOPS Messenger 5(4): 87-91 (1994)
	1993
16		David A. Brant, Daniel P. Miranker: Index Support for Rule Activation. SIGMOD Conference 1993: 42-48
15		Benjamin W. Wah, Thomas S. Huang, Aravind K. Joshi, Dan I. Moldovan, Yiannis Aloimonos, Ruzena Bajcsy, Dana H. Ballard, Doug DeGroot, Kenneth DeJong, Charles R. Dyer, Scott E. Fahlman, Ralph Grishman, Lynette Hirschman, Richard E. Korf, Stephen E. Levinson, Daniel P. Miranker, N. H. Morgan, Sergei Nirenburg, Tomaso Poggio, Edward M. Riseman, Craig Stanfil, Salvatore J. Stolfo, Steven L. Tanimoto, Charles C. Weems: Report on Workshop on High Performance Computing and Communications for Grand Challenge Applications: Computer Vision, Speech and Natural Language Processing, and Artificial Intelligence. IEEE Trans. Knowl. Data Eng. 5(1): 138-154 (1993)
	1992
14		Mark Perlin, Jaime G. Carbonell, Daniel P. Miranker, Salvatore J. Stolfo, Milind Tambe: Is Production System Match Interesting? ICTAI 1992: 2-3
	1991
13		David A. Brant, Timothy Grose, Bernie J. Lofaso, Daniel P. Miranker: Effects of Database Size on Rule System Performance: Five Case Studies. VLDB 1991: 287-296
12		Daniel P. Miranker, Bernie J. Lofaso: The Organization and Performance fo a TREAT-Based Production System Compiler. IEEE Trans. Knowl. Data Eng. 3(1): 3-10 (1991)
11		Daniel P. Miranker: Special Issue on the Parallel Execution of Rule Systems. J. Parallel Distrib. Comput. 13(4): 345-347 (1991)
10		Chin-Ming Kuo, Daniel P. Miranker, James C. Browne: On the Performance of the CREL System. J. Parallel Distrib. Comput. 13(4): 424-441 (1991)
	1990
9		Daniel P. Miranker, David A. Brant, Bernie J. Lofaso, David Gadbois: On the Performance of Lazy Matching in Production Systems. AAAI 1990: 685-692
8		Daniel P. Miranker, David A. Brant: An Algorithmic Basis for Integrating Production Systems and Large Databases. ICDE 1990: 353-360
7		Daniel P. Miranker, Archie D. Andrews: On Balanced Synchronous Parallel Computers for AI. ICPP (1) 1990: 489-493
6		Daniel P. Miranker, Chin-Ming Kuo, James C. Browne: Parallelizing Compilation of Rule-Based Programs. ICPP (2) 1990: 247-251
	1987
5		Daniel P. Miranker: TREAT: A Better Match Algorithm for AI Production System Matching. AAAI 1987: 42-47
	1986
4		Michael van Biema, Daniel P. Miranker, Salvatore J. Stolfo: The Do-loop Considered Harmful in Production System Programming. Expert Database Conf. 1986: 177-190
3		Salvatore J. Stolfo, Daniel P. Miranker: The DADO Production System Machine. J. Parallel Distrib. Comput. 3(2): 269-296 (1986)
	1984
2		Daniel P. Miranker: Performance Estimates for the DADO Machine: A Comparison of Treat and Rete. FGCS 1984: 449-457
	1983
1		Salvatore J. Stolfo, Daniel P. Miranker, David Elliot Shaw: Architecture and Applications of DADO: A Large-Scale Parallel Computer for Artificial Intelligence. IJCAI 1983: 850-854

Coauthor Index

1	Patrick Albert	[17]
2	Yiannis Aloimonos	[15]
3	Archie D. Andrews	[7]
4	Sapna Bafna	[54]
5	Ruzena Bajcsy	[15]
6	Dana H. Ballard	[15]
7	François Barbançon	[36] [40] [45] [51]
8	Brian M. Barry	[17]
9	Roberto J. Bayardo (Roberto J. Bayardo Jr.)	[18] [19] [22] [26] [28] [31]
10	Michael van Biema	[4]
11	David A. Brant	[8] [9] [13] [16]
12	Willard J. Briggs	[41] [44]
13	James C. Browne	[6] [10] [19] [20] [24]
14	Jaime G. Carbonell	[14]
15	Sarah E. Chodrow	[19]
16	Stephen Correl	[23]
17	Doug DeGroot	[15]
18	Kenneth DeJong	[15]
19	Brian Donnell	[17]
20	Michael J. Donoghue	[40]
21	Charles R. Dyer	[15]
22	E. Allen Emerson	[19]
23	Scott E. Fahlman	[15]
24	David Gadbois	[9] [19] [21]
25	Mohamed G. Gouda	[19]
26	Ralph Grishman	[15]
27	Timothy Grose	[13]
28	Robin Ray Gutell	[52]
29	F. Furman Haddix	[19]
30	Joseph M. Hellerstein	[34]
31	Thomas W. Hetherington	[19]
32	Lynette Hirschman	[15]
33	Thomas S. Huang	[15]
34	Julian Humphries	[54]
35	Qasim Iqbal	[48]
36	Vishwanath R. Iyer	[53]
37	Aravind K. Joshi	[15]
38	Richard E. Korf	[15]
39	Elias Koutsoupias	[34]
40	Chin-Ming Kuo	[6] [10]
41	Taejoon Kwon	[61]
42	Stephen E. Levinson	[15]
43	Zhihua Li	[62]
44	C. Randal Linder	[44]
45	Wenguo Liu	[44] [48]
46	Bernie J. Lofaso	[9] [12] [13]
47	Rui Mao	[38] [39] [41] [46] [47] [48] [49] [50] [56] [58]
48	Edward M. Marcotte	[49] [61] [62]
49	John McGehee	[17]
50	Aloysius K. Mok	[19]
51	Dan I. Moldovan	[15]
52	N. H. Morgan	[15]
53	Xochitl C. Morgan	[53]
54	Margaret Myers	[62]
55	Luay Nakhleh	[40]
56	Aleksey A. Nakorchevskiy	[49]
57	Shulin Ni	[41] [53]
58	Sergei Nirenburg	[15]
59	Glen Nuckolls	[47]
60	Lance Obermeyer	[19] [25] [30]
61	François Pachet	[17]
62	Anand Padmanaban	[35]
63	Joanna Padolina	[44]
64	Christos H. Papadimitriou	[34]
65	Luiz O. Penalva	[61] [62]
66	Mark Perlin	[14]
67	William H. Piel	[40]
68	Tomaso Poggio	[15]
69	John T. Prince	[49] [62]
70	Smriti R. Ramakrishnan	[47] [49] [56] [58] [61] [62]
71	Edward M. Riseman	[15]
72	Vasilis Samoladas	[29] [31] [32] [34]
73	Juan Sequeda	[57] [60]
74	David Elliot Shaw	[1]
75	Neha Singh	[39] [46]
76	Craig Stanfil	[15]
77	Salvatore J. Stolfo	[1] [3] [4] [14] [15]
78	Milind Tambe	[14]
79	Steven L. Tanimoto	[15]
80	Malcolm C. Taylor	[35]
81	Ruth E. Timme	[44]
82	Syed Hamid Tirmizi	[57] [60]
83	Duu-Chung Tsou	[19]
84	Christine Vogel	[61] [62]
85	Benjamin W. Wah	[15]
86	Chih-Kan Wang	[19]
87	Rong Wang	[62]
88	Rwo-Hsi Wang	[19]
89	Shu Wang	[50] [52]
90	Lane Warshaw	[27] [33]
91	Charles C. Weems	[15]
92	Willard S. Willard	[49]
93	Shiow-yang Wu	[20] [24]
94	Weijia Xu	[38] [39] [41] [42] [43] [44] [46] [47] [49] [50] [56] [58]

Colors in the list of coauthors