2006 | ||
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15 | Katrin Stierand, Patrick C. Maaß, Matthias Rarey: Molecular complexes at a glance: automated generation of two-dimensional complex diagrams. Bioinformatics 22(14): 1710-1716 (2006) | |
14 | Andreas Kämper, Joannis Apostolakis, Matthias Rarey, Christel M. Marian, Thomas Lengauer: Fully Automated Flexible Docking of Ligands into Flexible Synthetic Receptors Using Forward and Inverse Docking Strategies. Journal of Chemical Information and Modeling 46(2): 903-911 (2006) | |
2005 | ||
13 | Andrew E. Torda, Stefan Kurtz, Matthias Rarey: Proceedings of the German Conference on Bioinformatics (GCB 2005), Hamburg, Germany, October 5-7, 2005 GI 2005 | |
12 | Axel Griewel, Matthias Rarey: From greedy to branch & bound and back: Assessing optimization strategies for incremental construction molecular docking tools. German Conference on Bioinformatics 2005: 119-130 | |
2004 | ||
11 | Torsten Crass, Iris Antes, Rico Basekow, Peer Bork, Christian Buning, Maik Christensen, Holger Claussen, Christian Ebeling, Peter Ernst, Valérie Gailus-Durner, Karl-Heinz Glatting, Rolf Gohla, Frank Gößling, Korbinian Grote, Karsten R. Heidtke, Alexander Herrmann, Sean O'Keeffe, O. Kießlich, Sven Kolibal, Jan O. Korbel, Thomas Lengauer, Ines Liebich, Mark van der Linden, Hannes Luz, Kathrin Meissner, Christian von Mering, Heinz-Theodor Mevissen, Hans-Werner Mewes, Holger Michael, Martin Mokrejs, Tobias Müller, Heike Pospisil, Matthias Rarey, Jens G. Reich, Ralf Schneider, Dietmar Schomburg, Steffen Schulze-Kremer, Knut Schwarzer, Ingolf Sommer, Stephan Springstubbe, Sándor Suhai, Gnanasekaran Thoppae, Martin Vingron, Jens Warfsmann, Thomas Werner, Daniel Wetzler, Edgar Wingender, Ralf Zimmer: The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources. Bioinformatics 20(2): 268-270 (2004) | |
10 | Patrick C. Fricker, Marcus Gastreich, Matthias Rarey: Automated Drawing of Structural Molecular Formulas under Constraints. Journal of Chemical Information and Modeling 44(3): 1065-1078 (2004) | |
2002 | ||
9 | Matthias Rarey: Geometric Problems and Algorithms in Computer-Aided Molecular Design. GI Jahrestagung (Ergänzungsband) 2002: 61-62 | |
8 | Sally A. Hindle, Matthias Rarey, Christian Buning, Thomas Lengauer: Flexible docking under pharmacophore type constraints. Journal of Computer-Aided Molecular Design 16(2): 129-149 (2002) | |
2001 | ||
7 | Matthias Rarey, Martin Stahl: Similarity searching in large combinatorial chemistry spaces. Journal of Computer-Aided Molecular Design 15(6): 497-520 (2001) | |
1999 | ||
6 | Matthias Rarey, Bernd Kramer, Thomas Lengauer: Docking of hydrophobic ligands with interaction-based matching algorithms. Bioinformatics 15(3): 243-250 (1999) | |
1998 | ||
5 | Matthias Rarey, Bernd Kramer, Thomas Lengauer: Docking of hydrophobic ligands with interaction-based matching algorithms. German Conference on Bioinformatics 1998 | |
4 | Matthias Rarey, J. Scott Dixon: Feature trees: A new molecular similarity measure based on tree matching. Journal of Computer-Aided Molecular Design 12(5): 471-490 (1998) | |
1997 | ||
3 | Matthias Rarey, Bernd Kramer, Thomas Lengauer: Multiple automatic base selection: Protein-ligand docking based on incremental construction without manual intervention. Journal of Computer-Aided Molecular Design 11(4): 369-384 (1997) | |
1996 | ||
2 | Matthias Rarey, Stephan Wefing, Thomas Lengauer: Placement of medium-sized molecular fragments into active sites of proteins. Journal of Computer-Aided Molecular Design 10(1): 41-54 (1996) | |
1995 | ||
1 | Matthias Rarey, Bernd Kramer, Thomas Lengauer: Time-Efficient Docking of Flexible Ligands into Active Sites of Proteins. ISMB 1995: 300-308 |