Oliver Kohlbacher Coauthor index DBLP Vis pubzone.org

List of publications from the DBLP Bibliography Server - FAQ
Ask others: ACM DL/Guide - CiteSeerX - CSB - MetaPress - Google - Bing - Yahoo

DBLP keys2009
50Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErnst Althaus, Gunnar W. Klau, Oliver Kohlbacher, Hans-Peter Lenhof, Knut Reinert: Integer Linear Programming in Computational Biology. Efficient Algorithms 2009: 199-218
49Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSebastian J. Schultheiß, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch: KIRMES: kernel-based identification of regulatory modules in euchromatic sequences. Bioinformatics 25(16): 2126-2133 (2009)
48Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMagdalena Feldhahn, Pierre Dönnes, Philipp Thiel, Oliver Kohlbacher: FRED - a framework for T-cell epitope detection. Bioinformatics 25(20): 2758-2759 (2009)
47Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Keller, Christina Backes, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Eckart Meese, Hans-Peter Lenhof: A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis. Bioinformatics 25(21): 2787-2794 (2009)
46Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNora C. Toussaint, Oliver Kohlbacher: OptiTope - a web server for the selection of an optimal set of peptides for epitope-based vaccines. Nucleic Acids Research 37(Web-Server-Issue): 617-622 (2009)
2008
45no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSebastian J. Schultheiß, Wolfgang Busch, Jan Lohmann, Oliver Kohlbacher, Gunnar Rätsch: KIRMES: Kernel-based Identification of Regulatory Modules in Euchromatic Sequences. German Conference on Bioinformatics 2008: 158-167
44Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNico Pfeifer, Oliver Kohlbacher: Multiple Instance Learning Allows MHC Class II Epitope Predictions Across Alleles. WABI 2008: 210-221
43Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Keller, Christina Backes, Maher Al-Awadhi, Andreas Gerasch, Jan Küntzer, Oliver Kohlbacher, Michael Kaufmann, Hans-Peter Lenhof: GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments. BMC Bioinformatics 9: (2008)
42Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOle Schulz-Trieglaff, Nico Pfeifer, Clemens Gröpl, Oliver Kohlbacher, Knut Reinert: LC-MSsim - a simulation software for liquid chromatography mass spectrometry data. BMC Bioinformatics 9: (2008)
41Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMarc Sturm, Andreas Bertsch, Clemens Gröpl, Andreas Hildebrandt, Rene Hussong, Eva Lange, Nico Pfeifer, Ole Schulz-Trieglaff, Alexandra Zerck, Knut Reinert, Oliver Kohlbacher: OpenMS - An open-source software framework for mass spectrometry. BMC Bioinformatics 9: (2008)
40Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLWiebke Timm, Alexandra Scherbart, Sebastian Böcker, Oliver Kohlbacher, Tim W. Nattkemper: Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics. BMC Bioinformatics 9: (2008)
39Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTorsten Blum, Oliver Kohlbacher: MetaRoute: fast search for relevant metabolic routes for interactive network navigation and visualization. Bioinformatics 24(18): 2108-2109 (2008)
38Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTorsten Blum, Oliver Kohlbacher: Using Atom Mapping Rules for an Improved Detection of Relevant Routes in Weighted Metabolic Networks. Journal of Computational Biology 15(6): 565-576 (2008)
37Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMagdalena Feldhahn, Philipp Thiel, Mathias M. Schuler, Nina Hillen, Stefan Stevanovic, Hans-Georg Rammensee, Oliver Kohlbacher: EpiToolKit - a web server for computational immunomics. Nucleic Acids Research 36(Web-Server-Issue): 519-522 (2008)
2007
36no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTorsten Blum, Oliver Kohlbacher: Finding Relevant Biotransformation Routes in Weighted Metabolic Networks. German Conference on Bioinformatics 2007: 30-44
35Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJan Küntzer, Christina Backes, Torsten Blum, Andreas Gerasch, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof: BNDB - The Biochemical Network Database. BMC Bioinformatics 8: (2007)
34Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNico Pfeifer, Andreas Leinenbach, Christian G. Huber, Oliver Kohlbacher: Statistical learning of peptide retention behavior in chromatographic separations: a new kernel-based approach for computational proteomics. BMC Bioinformatics 8: (2007)
33Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLHagit Shatkay, Annette Höglund, Scott Brady, Torsten Blum, Pierre Dönnes, Oliver Kohlbacher: SherLoc: high-accuracy prediction of protein subcellular localization by integrating text and protein sequence data. Bioinformatics 23(11): 1410-1417 (2007)
32Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOliver Kohlbacher, Knut Reinert, Clemens Gröpl, Eva Lange, Nico Pfeifer, Ole Schulz-Trieglaff, Marc Sturm: TOPP - the OpenMS proteomics pipeline. Bioinformatics 23(2): 191-197 (2007)
31Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Hildebrandt, Ralf Blossey, Sergej Rjasanow, Oliver Kohlbacher, Hans-Peter Lenhof: Electrostatic potentials of proteins in water: a structured continuum approach. Bioinformatics 23(2): 99-103 (2007)
2006
30no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDaniel H. Huson, Oliver Kohlbacher, Andrei N. Lupas, Kay Nieselt, Andreas Zell: German Conference on Bioinformatics GCB 2006, 19.09. 2006 - 22.09. 2006 in Tübingen, Germany GI 2006
29no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChristian G. Huber, Oliver Kohlbacher, Knut Reinert: Computational Proteomics, 20.-25. November 2005 Internationales Begegnungs- und Forschungszentrum für Informatik (IBFI), Schloss Dagstuhl, Germany 2006
28Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAnnette Höglund, Torsten Blum, Scott Brady, Pierre Dönnes, John San Miguel, Matthew Rocheford, Oliver Kohlbacher, Hagit Shatkay: Significantly Improved Prediction of Subcellular Localization by Integrating Text and Protein Sequence Data . Pacific Symposium on Biocomputing 2006: 16-27
27Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEva Lange, Clemens Gröpl, Knut Reinert, Oliver Kohlbacher, Andreas Hildebrandt: High-Accuracy Peak Picking of Proteomics Data Using Wavelet Techniques. Pacific Symposium on Biocomputing 2006: 243-254
26Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAnnette Höglund, Pierre Dönnes, Torsten Blum, Hans-Werner Adolph, Oliver Kohlbacher: MultiLoc: prediction of protein subcellular localization using N-terminal targeting sequences, sequence motifs and amino acid composition. Bioinformatics 22(10): 1158-1165 (2006)
25Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Moll, Andreas Hildebrandt, Hans-Peter Lenhof, Oliver Kohlbacher: BALLView: a tool for research and education in molecular modeling. Bioinformatics 22(3): 365-366 (2006)
24Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJan Küntzer, Torsten Blum, Andreas Gerasch, Christina Backes, Andreas Hildebrandt, Michael Kaufmann, Oliver Kohlbacher, Hans-Peter Lenhof: BN++ - A Biological Information System. J. Integrative Bioinformatics 3(2): (2006)
23Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDirk Neumann, Oliver Kohlbacher, Christian Merkwirth, Thomas Lengauer: A Fully Computational Model for Predicting Percutaneous Drug Absorption. Journal of Chemical Information and Modeling 46(1): 424-429 (2006)
22Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Kerzmann, Dirk Neumann, Oliver Kohlbacher: SLICK - Scoring and Energy Functions for Protein-Carbohydrate Interactions. Journal of Chemical Information and Modeling 46(4): 1635-1642 (2006)
21Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPierre Dönnes, Oliver Kohlbacher: SVMHC: a server for prediction of MHC-binding peptides. Nucleic Acids Research 34(Web-Server-Issue): 194-197 (2006)
2005
20no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMichael R. Berthold, Robert C. Glen, Kay Diederichs, Oliver Kohlbacher, Ingrid Fischer: Computational Life Sciences, First International Symposium, CompLife 2005, Konstanz, Germany, September 25-27, 2005, Proceedings Springer 2005
19Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLClemens Gröpl, Eva Lange, Knut Reinert, Oliver Kohlbacher, Marc Sturm, Christian G. Huber, Bettina M. Mayr, Christoph L. Klein: Algorithms for the Automated Absolute Quantification of Diagnostic Markers in Complex Proteomics Samples. CompLife 2005: 151-162
18Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChristian G. Huber, Oliver Kohlbacher, Knut Reinert: 05471 Abstract Collection - Computational Proteomics. Computational Proteomics 2005
17Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLChristian G. Huber, Oliver Kohlbacher, Knut Reinert: 05471 Executive Summary - Computational Proteomics. Computational Proteomics 2005
16Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMarc Sturm, Sascha Quinten, Christian G. Huber, Oliver Kohlbacher: A machine learning approach for prediction of DNA and peptide retention times. Computational Proteomics 2005
15Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNathanaël Delmotte, Bettina M. Mayr, Andreas Leinenbach, Knut Reinert, Oliver Kohlbacher, Christoph L. Klein, Christian G. Huber: Evaluation of LC-MS data for the absolute quantitative analysis of marker proteins. Computational Proteomics 2005
14Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEva Lange, Clemens Gröpl, Oliver Kohlbacher, Andreas Hildebrandt: High-accuracy peak picking of proteomics data. Computational Proteomics 2005
13no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAnnette Höglund, Pierre Dönnes, Torsten Blum, Hans-Werner Adolph, Oliver Kohlbacher: Using N-terminal targeting sequences, amino acid composition, and sequence motifs for predicting protein subcellular localizations. German Conference on Bioinformatics 2005: 45-59
12Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJochen Supper, Pierre Dönnes, Oliver Kohlbacher: Analysis of MHC-Peptide Binding Using Amino Acid Property-Based Decision Rules. ICAPR (1) 2005: 446-453
2004
11Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOliver Kohlbacher, Knut Reinert: Differenzielle Proteomanalyse - Experimentelle Methoden, algorithmische Herausforderungen (Differential Analysis in Proteomics: Experimental Methods, Algorithmic Challenges). it - Information Technology 46(1): 31-38 (2004)
2003
10Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLLiliana Florea, Bjarni V. Halldórsson, Oliver Kohlbacher, Russell Schwartz, Stephen Hoffman, Sorin Istrail: Epitope Prediction Algorithms for Peptide based Vaccine Design. CSB 2003: 17-26
2002
9no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMarite Sirava, T. Schäfer, Markus Eiglsperger, Michael Kaufmann, Oliver Kohlbacher, Erich Bornberg-Bauer, Hans-Peter Lenhof: BioMiner - modeling, analyzing, and visualizing biochemical pathways and networks. ECCB 2002: 219-230
8no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErnst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller: A Combinatorial Approach to Protein Docking with Flexible Side Chains. Journal of Computational Biology 9(4): 597-612 (2002)
2001
7Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRussell J. Turner, Kabir Chaturvedi, Nathan Edwards, Daniel P. Fasulo, Aaron L. Halpern, Daniel H. Huson, Oliver Kohlbacher, Jason R. Miller, Knut Reinert, Karin A. Remington, Russell Schwartz, Brian Walenz, Shibu Yooseph, Sorin Istrail: Visualization challenges for a new cyberpharmaceutical computing paradigm. IEEE Symposium on Parallel and Large-Data Visualization and Graphics 2001: 7-18
6Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOliver Kohlbacher, Andreas Burchardt, Andreas Moll, Andreas Hildebrandt, Peter Bayer, Hans-Peter Lenhof: A NMR-spectra-based scoring function for protein docking. RECOMB 2001: 184-192
2000
5Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErnst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller: A combinatorial approach to protein docking with flexible side-chains. RECOMB 2000: 15-24
4Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNicolas Boghossian, Oliver Kohlbacher, Hans-Peter Lenhof: Rapid Software Prototyping in Molecular Modeling Using the Biochemical Algorithms Library (BALL). ACM Journal of Experimental Algorithmics 5: 16 (2000)
3no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOliver Kohlbacher, Hans-Peter Lenhof: BALL-rapid software prototyping in computational molecular biology. Bioinformatics 16(9): 815-824 (2000)
1999
2Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNicolas Boghossian, Oliver Kohlbacher, Hans-Peter Lenhof: BALL: Biochemical Algorithms Library. Algorithm Engineering 1999: 331-345
1no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLOliver Kohlbacher, Hans-Peter Lenhof: Rapid Software Prototyping in Computational Molecular Biology. German Conference on Bioinformatics 1999: 81-92

Coauthor Index

1Hans-Werner Adolph [13] [26]
2Maher Al-Awadhi [43]
3Ernst Althaus [5] [8] [50]
4Christina Backes [24] [35] [43] [47]
5Peter Bayer [6]
6Michael R. Berthold [20]
7Andreas Bertsch [41]
8Ralf Blossey [31]
9Torsten Blum [13] [24] [26] [28] [33] [35] [36] [38] [39]
10Sebastian Böcker [40]
11Nicolas Boghossian [2] [4]
12Erich Bornberg-Bauer [9]
13Scott Brady [28] [33]
14Andreas Burchardt [6]
15Wolfgang Busch [45] [49]
16Kabir Chaturvedi [7]
17Nathanaël Delmotte [15]
18Kay Diederichs [20]
19Pierre Dönnes [12] [13] [21] [26] [28] [33] [48]
20Nathan Edwards [7]
21Markus Eiglsperger [9]
22Daniel P. Fasulo [7]
23Magdalena Feldhahn [37] [48]
24Ingrid Fischer [20]
25Liliana Florea [10]
26Andreas Gerasch [24] [35] [43] [47]
27Robert C. Glen [20]
28Clemens Gröpl [14] [19] [27] [32] [41] [42]
29Bjarni V. Halldórsson [10]
30Aaron L. Halpern [7]
31Andreas Hildebrandt [6] [14] [24] [25] [27] [31] [41]
32Nina Hillen [37]
33Stephen Hoffman [10]
34Annette Höglund [13] [26] [28] [33]
35Christian G. Huber [15] [16] [17] [18] [19] [29] [34]
36Daniel H. Huson [7] [30]
37Rene Hussong [41]
38Sorin Istrail [7] [10]
39Michael Kaufmann [9] [24] [35] [43] [47]
40Andreas Keller [43] [47]
41Andreas Kerzmann [22]
42Gunnar W. Klau [50]
43Christoph L. Klein [15] [19]
44Jan Küntzer [24] [35] [43]
45Eva Lange [14] [19] [27] [32] [41]
46Andreas Leinenbach [15] [34]
47Thomas Lengauer [23]
48Hans-Peter Lenhof [1] [2] [3] [4] [5] [6] [8] [9] [24] [25] [31] [35] [43] [47] [50]
49Jan Lohmann [45] [49]
50Andrei N. Lupas [30]
51Bettina M. Mayr [15] [19]
52Eckart Meese [47]
53Christian Merkwirth [23]
54John San Miguel [28]
55Jason R. Miller [7]
56Andreas Moll [6] [25]
57Peter Müller [5] [8]
58Tim W. Nattkemper [40]
59Dirk Neumann [22] [23]
60Kay Nieselt [30]
61Nico Pfeifer [32] [34] [41] [42] [44]
62Sascha Quinten [16]
63Hans-Georg Rammensee [37]
64Gunnar Rätsch [45] [49]
65Knut Reinert [7] [11] [15] [17] [18] [19] [27] [29] [32] [41] [42] [50]
66Karin A. Remington [7]
67Sergej Rjasanow [31]
68Matthew Rocheford [28]
69T. Schäfer [9]
70Alexandra Scherbart [40]
71Mathias M. Schuler [37]
72Sebastian J. Schultheiß [45] [49]
73Ole Schulz-Trieglaff [32] [41] [42]
74Russell Schwartz [7] [10]
75Hagit Shatkay [28] [33]
76Marite Sirava [9]
77Stefan Stevanovic [37]
78Marc Sturm [16] [19] [32] [41]
79Jochen Supper [12]
80Philipp Thiel [37] [48]
81Wiebke Timm [40]
82Nora C. Toussaint [46]
83Russell J. Turner [7]
84Brian Walenz [7]
85Shibu Yooseph [7]
86Andreas Zell [30]
87Alexandra Zerck [41]

Colors in the list of coauthors

Copyright © Sun Mar 14 22:39:24 2010 by Michael Ley (ley@uni-trier.de)